RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 IGSF8Q969P0 613 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 TADA1Q96BN2 335 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 C3orf30Q96M34 536 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 YME1L1Q96TA2 773 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 KCNS3Q9BQ31 491 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 SERHL2Q9H4I8 314 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 SERHLQ9NQF3 203 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 ARMC1Q9NVT9 282 aa13.02□□□□□ -0.33
DDX54-201ENST00000306014 GMPR2Q9P2T1 348 aaKnown RBP13.02□□□□□ -0.33
DDX54-201ENST00000306014 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
DDX54-201ENST00000306014 PLK4O00444 970 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 SYN3O14994 580 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PRAMEF11O60813 436 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 NR2F1P10589 423 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 GABRB3P28472 473 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 COPZ1P61923 177 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 GDF6Q6KF10 455 aaPredicted RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 C1GALT1C1Q96EU7 318 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 LRCH3Q96II8 777 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 MAGEB10Q96LZ2 347 aaPredicted RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 KCNC2Q96PR1 638 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 SMCHD1A6NHR9 2005 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 VILLO15195 856 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 EPOP01588 193 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 OPN1SWP03999 348 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 ENGP17813 658 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 TNNI3P19429 210 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 RAB14P61106 215 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 AP1S1P61966 158 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 NFATC3Q12968 1075 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 TUBB3Q13509 450 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 ZFP69Q49AA0 526 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 NIPAL1Q6NVV3 410 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 CLEC14AQ86T13 490 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 HDAC2Q92769 488 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 PAWRQ96IZ0 340 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 SEZ6LQ9BYH1 1024 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 ABCB9Q9NP78 766 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 ZNF221Q9UK13 617 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 SLC38A8A6NNN8 435 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 B4GAT1O43505 415 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 CAPN15O75808 1086 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 RPLP0P05388 317 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 POLR2EP19388 210 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 S100A1P23297 94 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 DNAJA1P31689 397 aaKnown RBP13.01□□□□□ -0.33
DDX54-201ENST00000306014 QPRTQ15274 297 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 UPP1Q16831 310 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PLEKHG6Q3KR16 790 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 SPATS1Q496A3 300 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 GAB3Q8WWW8 586 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PYURFQ96I23 114 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
DDX54-201ENST00000306014 SEPT4O43236 478 aa13□□□□□ -0.33
DDX54-201ENST00000306014 NPPAP01160 153 aa13□□□□□ -0.33
DDX54-201ENST00000306014 NR2F6P10588 404 aa13□□□□□ -0.33
DDX54-201ENST00000306014 FDXRP22570 491 aa13□□□□□ -0.33
DDX54-201ENST00000306014 NSG1P42857 185 aa13□□□□□ -0.33
DDX54-201ENST00000306014 ASMTP46597 345 aa13□□□□□ -0.33
DDX54-201ENST00000306014 CCL23P55773 120 aa13□□□□□ -0.33
DDX54-201ENST00000306014 SRSF11Q05519 484 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 C2orf80Q0P641 193 aa13□□□□□ -0.33
DDX54-201ENST00000306014 PAGE3Q5JUK9 113 aa13□□□□□ -0.33
DDX54-201ENST00000306014 SNX20Q7Z614 316 aa13□□□□□ -0.33
DDX54-201ENST00000306014 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 COQ7Q99807 217 aa13□□□□□ -0.33
DDX54-201ENST00000306014 SDR39U1Q9NRG7 319 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 H3BMQ9 156 aa13□□□□□ -0.33
DDX54-201ENST00000306014 C7P10643 843 aa13□□□□□ -0.33
DDX54-201ENST00000306014 GABRR2P28476 465 aa13□□□□□ -0.33
DDX54-201ENST00000306014 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 KCNJ9Q92806 393 aa13□□□□□ -0.33
DDX54-201ENST00000306014 L3HYPDHQ96EM0 354 aa13□□□□□ -0.33
DDX54-201ENST00000306014 COG8Q96MW5 612 aa13□□□□□ -0.33
DDX54-201ENST00000306014 ZNF382Q96SR6 550 aa13□□□□□ -0.33
DDX54-201ENST00000306014 DUSP26Q9BV47 211 aa13□□□□□ -0.33
DDX54-201ENST00000306014 POPDC3Q9HBV1 291 aa13□□□□□ -0.33
DDX54-201ENST00000306014 NLE1Q9NVX2 485 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 PEX16Q9Y5Y5 336 aa13□□□□□ -0.33
DDX54-201ENST00000306014 EEDO75530 441 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 RPL3P39023 403 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 MANFP55145 182 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 GALNT1Q10472 559 aaPredicted RBP13□□□□□ -0.33
DDX54-201ENST00000306014 SMARCB1Q12824 385 aa13□□□□□ -0.33
DDX54-201ENST00000306014 COX10Q12887 443 aa13□□□□□ -0.33
DDX54-201ENST00000306014 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
DDX54-201ENST00000306014 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
DDX54-201ENST00000306014 CHERPQ8IWX8 916 aaKnown RBP13□□□□□ -0.33
DDX54-201ENST00000306014 UBE2J2Q8N2K1 259 aa13□□□□□ -0.33
DDX54-201ENST00000306014 OMA1Q96E52 524 aa13□□□□□ -0.33
DDX54-201ENST00000306014 CFAP97Q9P2B7 532 aa13□□□□□ -0.33
DDX54-201ENST00000306014 TNKS1BP1Q9C0C2 1729 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms