RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 NANOGP8Q6NSW7 305 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 TMEM154Q6P9G4 183 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SYCE2Q6PIF2 218 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PARM1Q6UWI2 310 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 HACD2Q6Y1H2 254 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 ZFAND4Q86XD8 727 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 UBTD2Q8WUN7 234 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 SUSD6Q92537 303 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 KLK6Q92876 244 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 TMEM125Q96AQ2 219 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PPWD1Q96BP3 646 aaKnown RBP11.1□□□□□ -0.63
SCG2-201ENST00000305409 EGLN2Q96KS0 407 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 TSSK3Q96PN8 268 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 MTERF1Q99551 399 aaKnown RBP11.1□□□□□ -0.63
SCG2-201ENST00000305409 ELOVL6Q9H5J4 265 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 NANOGQ9H9S0 305 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 DLGAP2Q9P1A6 1054 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 PCDHA9Q9Y5H5 950 aa11.1□□□□□ -0.63
SCG2-201ENST00000305409 EDDM13A0A1B0GTR0 161 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ATG13O75143 517 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 EEDO75530 441 aaKnown RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 SLC16A8O95907 504 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 FTH1P02794 183 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 CD22P20273 847 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 MAP4P27816 1152 aaKnown RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 OXTRP30559 389 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 GSK3BP49841 420 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 KLC1Q07866 573 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 RUNX3Q13761 415 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ELAVL3Q14576 367 aaKnown RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 SPANXN4Q5MJ08 99 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ANKRD46Q86W74 232 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 MINDY1Q8N5J2 469 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 NUS1Q96E22 293 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 APIPQ96GX9 242 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ANKRD27Q96NW4 1050 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 HOPXQ9BPY8 73 aaPredicted RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 EBPLQ9BY08 206 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 TMEM245Q9H330 911 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 PRSS16Q9NQE7 514 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 HEBP1Q9NRV9 189 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ZIM2Q9NZV7 527 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 LEF1Q9UJU2 399 aaPredicted RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 ZNF106Q9H2Y7 1883 aaKnown RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 DOCK9Q9BZ29 2069 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 E7EQ34 232 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 DFNA5O60443 496 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 SLCO2B1O94956 709 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ITGB7P26010 798 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 GDI1P31150 447 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 P2RY2P41231 377 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 SLC6A12P48065 614 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 RHDQ02161 417 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 DLX2Q07687 328 aaPredicted RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 BLMHQ13867 455 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 GK3PQ14409 553 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 MTX3Q5HYI7 312 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 LDLRAP1Q5SW96 308 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 OGFRL1Q5TC84 451 aaPredicted RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 ICA1LQ8NDH6 482 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 CDC26Q8NHZ8 85 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 APOLD1Q96LR9 279 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 PPP3R2Q96LZ3 170 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 CCM2Q9BSQ5 444 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 DYRK4Q9NR20 520 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 THG1LQ9NWX6 298 aaKnown RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
SCG2-201ENST00000305409 ATXN10Q9UBB4 475 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 TRPS1Q9UHF7 1281 aa11.09□□□□□ -0.63
SCG2-201ENST00000305409 AREL1O15033 823 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 AXIN1O15169 862 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 KAT7O95251 611 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 MPC1LP0DKB6 136 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 BCKDHAP12694 445 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 VARSP26640 1264 aaKnown RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 NFE2L1Q14494 772 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 XKR6Q5GH73 641 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 ZFP1Q6P2D0 407 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 GPR149Q86SP6 731 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 CHPFQ8IZ52 775 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 TMEM102Q8N9M5 508 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 PKP4Q99569 1192 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 KCTD14Q9BQ13 255 aaPredicted RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 DPY30Q9C005 99 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 ALG2Q9H553 416 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 TM7SF3Q9NS93 570 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 SLC6A13Q9NSD5 602 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 DNAJC11Q9NVH1 559 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 SERGEFQ9UGK8 458 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 BCAP29Q9UHQ4 241 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 PLAGL1Q9UM63 463 aa11.08□□□□□ -0.64
SCG2-201ENST00000305409 EIF3LQ9Y262 564 aaKnown RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 CFAP20Q9Y6A4 193 aaKnown RBP11.08□□□□□ -0.64
SCG2-201ENST00000305409 CROCCQ5TZA2 2017 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms