RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 N4BP2L2Q92802 583 aaPredicted RBP25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 SLCO2A1Q92959 643 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 SLC22A18Q96BI1 424 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 FOPNLQ96NB1 174 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 RAB11FIP5Q9BXF6 653 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 GPR87Q9BY21 358 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 CHRNA10Q9GZZ6 450 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 GEMIN8Q9NWZ8 242 aaKnown RBP25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 ASIC3Q9UHC3 531 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 CRYL1Q9Y2S2 319 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 MAD1L1Q9Y6D9 718 aa25.55■■□□□ 1.68
CDKN2A-201ENST00000304494 USP1O94782 785 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 RECKO95980 971 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 ITGA1P56199 1179 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 POLE2P56282 527 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 RNASEH2BQ5TBB1 312 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 ZNF470Q6ECI4 717 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 CDHR3Q6ZTQ4 885 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 PCGF5Q86SE9 256 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 TRIM73Q86UV7 250 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 LMNTD2Q8IXW0 634 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 OR1L3Q8NH93 324 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 FLVCR1-AS1Q8TAF5 88 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 SEC14L1Q92503 715 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 CLIP3Q96DZ5 547 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 TRIM56Q9BRZ2 755 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 DDX47Q9H0S4 455 aaKnown RBP25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 PCYOX1Q9UHG3 505 aa25.54■■□□□ 1.68
CDKN2A-201ENST00000304494 B8ZZF3 427 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 E7EQ34 232 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 CREG1O75629 220 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 CHRM3P20309 590 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 CD9P21926 228 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 RPS15P62841 145 aaKnown RBP25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 PTK6Q13882 451 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 LONRF1Q17RB8 773 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 CENPUQ71F23 418 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 RAB42Q8N4Z0 105 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 MAGEC3Q8TD91 643 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 MR1Q95460 341 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 RAD51AP1Q96B01 352 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 MENTQ9BUN1 341 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 FAM117AQ9C073 453 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 SLC7A5P2Q9GIP4 190 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 SLC39A10Q9ULF5 831 aa25.53■■□□□ 1.68
CDKN2A-201ENST00000304494 ZCWPW2A0A1B0GU75 182 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 CTAGE9A4FU28 777 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 E5RI56 91 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 RASGRF2O14827 1237 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 NIPSNAP2O75323 286 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 PKMP14618 531 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 ATP5DP30049 168 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 CCNFP41002 786 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 GPS2Q13227 327 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 ERV3-1Q14264 604 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 GRB7Q14451 532 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 DEFB109BQ30KR1 87 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 ZNF789Q5FWF6 425 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 PAPD7Q5XG87 772 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 FAM199XQ6PEV8 388 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 ZNF517Q6ZMY9 492 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 GPR135Q8IZ08 494 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 SLC38A9Q8NBW4 561 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 OR2L8Q8NGY9 312 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 CALML6Q8TD86 181 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 APOBEC4Q8WW27 367 aaKnown RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 SIGLEC10Q96LC7 697 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 RUNDC3BQ96NL0 473 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 NAPGQ99747 312 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 ACTR5Q9H9F9 607 aaPredicted RBP25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 IL1RAPL1Q9NZN1 696 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 TUBD1Q9UJT1 453 aa25.52■■□□□ 1.68
CDKN2A-201ENST00000304494 MEN1O00255 615 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 DNALI1O14645 258 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 S1PR4O95977 384 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 HBQ1P09105 142 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 PTPN4P29074 926 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 PEBP1P30086 187 aaKnown RBP25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 KCNAB2Q13303 367 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 ATP1A1-AS1Q5TC04 95 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 IZUMO3Q5VZ72 239 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 DSELQ8IZU8 1212 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 LINC01555Q8NAE3 123 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 CAPZA3Q96KX2 299 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 ACTL8Q9H568 366 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 AKIRIN1Q9H9L7 192 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 FAM60AQ9NP50 221 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 STARD5Q9NSY2 213 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 C20orf96Q9NUD7 363 aaPredicted RBP25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 SAR1BQ9Y6B6 198 aa25.51■■□□□ 1.67
CDKN2A-201ENST00000304494 C1orf105O95561 183 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 NFATC3Q12968 1075 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 GBX1Q14549 363 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 ZIC1Q15915 447 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 PRAMEF17Q5VTA0 474 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 SYDE1Q6ZW31 735 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 AGGF1Q8N302 714 aaeCLIP25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 ZBTB2Q8N680 514 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 SLC25A18Q9H1K4 315 aa25.5■■□□□ 1.67
CDKN2A-201ENST00000304494 CCDC68Q9H2F9 335 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms