RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 LSM1O15116 133 aaKnown RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 VPS4BO75351 444 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 RPL38P63173 70 aaKnown RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 RCAN2Q14206 197 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 ARHGAP15Q53QZ3 475 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 FBXO46Q6PJ61 603 aaPredicted RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 RALGPS2Q86X27 583 aaPredicted RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 KIAA2013Q8IYS2 634 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 FBXL8Q96CD0 374 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 PLEKHA8Q96JA3 519 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 COG8Q96MW5 612 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 MCCC1Q96RQ3 725 aaPredicted RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 ACTL8Q9H568 366 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 RPF2Q9H7B2 306 aaKnown RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 OTCP00480 354 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 POLR2EP19388 210 aaKnown RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 RXRGP48443 463 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 NEK2P51955 445 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 CHST15Q7LFX5 561 aaPredicted RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 DDHD1Q8NEL9 900 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 ISG20Q96AZ6 181 aaKnown RBP21.43■■□□□ 1.02
TPM4-201ENST00000300933 PPM1MQ96MI6 270 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 EFHD1Q9BUP0 239 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 PDE10AQ9Y233 779 aa21.43■■□□□ 1.02
TPM4-201ENST00000300933 TCRBV3S1A0A5B6 114 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 TMEM202A6NGA9 273 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 BBIP1A8MTZ0 92 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 K7EPI3 171 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 MT-ND1P03886 318 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 NANOGP8Q6NSW7 305 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 C12orf40Q86WS4 652 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 GPR65Q8IYL9 337 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 OFCC1Q8IZS5 231 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 CYGBQ8WWM9 190 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 NPLQ9BXD5 320 aaPredicted RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 PCDH12Q9NPG4 1184 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 ST14Q9Y5Y6 855 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 IRAK3Q9Y616 596 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 NUP214P35658 2090 aaPredicted RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 AGAP14A8MT82 685 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 SERPINB7O75635 380 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 FUCA1P04066 466 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 PHEXP78562 749 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 FPGSQ05932 587 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 ZNF77Q15935 545 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 CYP20A1Q6UW02 462 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 HACD2Q6Y1H2 254 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 DCDC5Q6ZRR9 648 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 UBE2R2Q712K3 238 aaPredicted RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 METTL3Q86U44 580 aaKnown RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 BORCS5Q969J3 196 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 CPEB1Q9BZB8 566 aaKnown RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 SUN2Q9UH99 717 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 GSTM4Q03013 218 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 PPP4R4Q6NUP7 873 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 SFTPA1Q8IWL2 248 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 RNF175Q8N4F7 328 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 LILRA3Q8N6C8 439 aaPredicted RBP21.42■■□□□ 1.02
TPM4-201ENST00000300933 TBC1D15Q8TC07 691 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 ATG10Q9H0Y0 220 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 GID8Q9NWU2 228 aa21.42■■□□□ 1.02
TPM4-201ENST00000300933 OXTRP30559 389 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 ZNF829Q3KNS6 432 aaPredicted RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 LYPLAL1Q5VWZ2 237 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 SLC22A15Q8IZD6 547 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 CENPSQ8N2Z9 138 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 MINDY1Q8N5J2 469 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 TMEM125Q96AQ2 219 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 ULK4Q96C45 1275 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 FBXL20Q96IG2 436 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 HOPXQ9BPY8 73 aaPredicted RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 BRINP2Q9C0B6 783 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 POLR1BQ9H9Y6 1135 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 KCTD5Q9NXV2 234 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 ZNF490Q9ULM2 529 aaPredicted RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 PLXNB3Q9ULL4 1909 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 MTCL1Q9Y4B5 1905 aaKnown RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 ZFC3H1O60293 1989 aaKnown RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 RNF103-CHMP3A0A140T963 221 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 LINC01553A4QN01 128 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 PLK4O00444 970 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 YAP1P46937 504 aaKnown RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 GRIN2CQ14957 1233 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 RAB39AQ14964 217 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 NEDD8Q15843 81 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 TMC5Q6UXY8 1006 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 FRS2Q8WU20 508 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 RSPRY1Q96DX4 576 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 MRGPRX3Q96LB0 322 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 ZNF641Q96N77 438 aaPredicted RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 RIOK2Q9BVS4 552 aaKnown RBP21.41■■□□□ 1.02
TPM4-201ENST00000300933 YIPF2Q9BWQ6 316 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 PRKAG2Q9UGJ0 569 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 PCDHA9Q9Y5H5 950 aa21.41■■□□□ 1.02
TPM4-201ENST00000300933 STK16O75716 305 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 EN2P19622 333 aaPredicted RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 ITPKAP23677 461 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 EPHA5P54756 1037 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 MTPNP58546 118 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 SELPLGQ14242 412 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms