RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PROSER1Q86XN7 944 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 CCDC103Q8IW40 242 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 LIX1Q8N485 282 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 KCNJ9Q92806 393 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF382Q96SR6 550 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 OPTCQ9UBM4 332 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 INVSQ9Y283 1065 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 LOC105371267A0A1B0GV96 52 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 UPK3BL1B0FP48 263 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 UPK3BL2E5RIL1 263 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 OR7A17O14581 309 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ULK1O75385 1050 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 CLDN7O95471 211 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ESR1P03372 595 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 DCKP27707 260 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 AKT1P31749 480 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 LRRC73Q5JTD7 316 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 DLEU7Q6UYE1 221 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 EID2BQ96D98 161 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ITCHQ96J02 903 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 SH3GL1Q99961 368 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF490Q9ULM2 529 aaPredicted RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 EIF3LQ9Y262 564 aaKnown RBP13.17□□□□□ -0.3
CTDP1-202ENST00000299543 PRSS21Q9Y6M0 314 aa13.17□□□□□ -0.3
CTDP1-202ENST00000299543 KRT87PA6NCN2 255 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF840PA6NDX5 716 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 G3V2T6 193 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
CTDP1-202ENST00000299543 UMPSP11172 480 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF7P17097 686 aaPredicted RBP13.16□□□□□ -0.3
CTDP1-202ENST00000299543 CR2P20023 1033 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 HTR1EP28566 365 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 RGS4P49798 205 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 SMAD3P84022 425 aaKnown RBP13.16□□□□□ -0.3
CTDP1-202ENST00000299543 MEP1AQ16819 746 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ELMOD1Q8N336 334 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 EGLN2Q96KS0 407 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 TSSK3Q96PN8 268 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 MROQ9BYG7 248 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 BRINP2Q9C0B6 783 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 IKZF5Q9H5V7 419 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 STARD7Q9NQZ5 370 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ILVBLA1L0T0 632 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 FAM92AA1XBS5 289 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 PCP4L1A6NKN8 68 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 H3BNC9 293 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ICMTO60725 284 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 CLPXO76031 633 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 PRKD3O94806 890 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 B3GALT4O96024 378 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 OTCP00480 354 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 PRR35P0CG20 571 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 THRBP10828 461 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 CAP1Q01518 475 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 VAC14Q08AM6 782 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ADGRF1Q5T601 910 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ADAMTSL2Q86TH1 951 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 SLC13A3Q8WWT9 602 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 SNX19Q92543 992 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 PYCR2Q96C36 320 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 OR52E6Q96RD3 313 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 SLC7A5P2Q9GIP4 190 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 TOR3AQ9H497 397 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 ACTL8Q9H568 366 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 DHRS7Q9Y394 339 aa13.16□□□□□ -0.3
CTDP1-202ENST00000299543 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 KRT8P05787 483 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CLCN7P51798 805 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CCNYL2Q5T2Q4 361 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TPGS1Q6ZTW0 290 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 DET1Q7L5Y6 550 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 GALNT5Q7Z7M9 940 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ACTR8Q9H981 624 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CD320Q9NPF0 282 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 MEN1O00255 615 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TEX28O15482 410 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 SMAD6O43541 496 aaKnown RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 NBNO60934 754 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CDH1P12830 882 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 GTF2H3Q13889 308 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 DAG1Q14118 895 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms