RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 GRPEL2Q8TAA5 225 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NETO1Q8TDF5 533 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 RNF170Q96K19 258 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PITX2Q99697 317 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 KLK14Q9P0G3 267 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PNMA8CA0A1B0GUJ8 204 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 ASB14A6NK59 587 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 LOC110117498-PIK3R3F6TDL0 507 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 CCRL2O00421 344 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 KCNE1P15382 129 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 M6PRP20645 277 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 STC1P52823 247 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 MAXP61244 160 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 TYSND1Q2T9J0 566 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 XKR4Q5GH76 650 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 KIAA1614Q5VZ46 1190 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 LETMD1Q6P1Q0 360 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NOTUMQ6P988 496 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 ZNF598Q86UK7 904 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 OR52B6Q8NGF0 335 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PEX13Q92968 403 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 CDK15Q96Q40 435 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 ZFP14Q9HCL3 533 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 NT5MQ9NPB1 228 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PDGFCQ9NRA1 345 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 PLSCR3Q9NRY6 295 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 TRMT13Q9NUP7 481 aaKnown RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 AP3M1Q9Y2T2 418 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 LYVE1Q9Y5Y7 322 aa13.22□□□□□ -0.29
RPUSD4-201ENST00000298317 TRBV5-3A0A0A0MS03 114 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 E9PQ18 207 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 MUSKO15146 869 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TRAPPC2P0DI81 140 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TRAPPC2BP0DI82 140 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 EPHA2P29317 976 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 SLC15A1P46059 708 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 IL1RL1Q01638 556 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 DSC2Q02487 901 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 RAD51Q06609 339 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ARHGAP1Q07960 439 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 DUSP7Q16829 419 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TIGD6Q17RP2 521 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ERAP2Q6P179 960 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 CALHM3Q86XJ0 350 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ZDHHC21Q8IVQ6 265 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 RTL3Q8N8U3 475 aaKnown RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PSD4Q8NDX1 1056 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 DNASE1L2Q92874 299 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PCED1BQ96HM7 432 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PRDM8Q9NQV8 689 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PAQR5Q9NXK6 330 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TAS2R9Q9NYW1 312 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 MRPL42Q9Y6G3 142 aaKnown RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TNS1Q9HBL0 1735 aaKnown RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ERVH48-1M5A8F1 160 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PCDHGA12O60330 932 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PAGE1O75459 146 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 RHOBTB1O94844 696 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 GLULP15104 373 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 CTRB1P17538 263 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 AKT1P31749 480 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ARL1P40616 181 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 GZMMP51124 257 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TTLL4Q14679 1199 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 PTPRCAPQ14761 206 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 NR6A1Q15406 480 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 NFE2Q16621 373 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 MAPKAPK3Q16644 382 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 RFTN2Q52LD8 501 aaPredicted RBP13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 SPANXN2Q5MJ10 180 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 CTRB2Q6GPI1 263 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TOR1AIP2Q8NFQ8 470 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 SETD6Q8TBK2 473 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 ESAMQ96AP7 390 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 TADA1Q96BN2 335 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 DMRTB1Q96MA1 342 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 OR2A14Q96R47 310 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 CATSPERZQ9NTU4 200 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 FAM50BQ9Y247 325 aa13.21□□□□□ -0.29
RPUSD4-201ENST00000298317 GBF1Q92538 1859 aa13.21□□□□□ -0.3
RPUSD4-201ENST00000298317 IRAK2O43187 625 aa13.2□□□□□ -0.3
RPUSD4-201ENST00000298317 RPP40O75818 363 aaKnown RBP13.2□□□□□ -0.3
RPUSD4-201ENST00000298317 NAGAP17050 411 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms