RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 PHEXP78562 749 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 ZXDBP98169 803 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 RAPSNQ13702 412 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 SF1Q15637 639 aaKnown RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 MOGQ16653 247 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 RGMBQ6NW40 437 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 ZBTB2Q8N680 514 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 KAT8Q9H7Z6 458 aaKnown RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 PCDH12Q9NPG4 1184 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 RNF186Q9NXI6 227 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 LRFN2Q9ULH4 789 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 CLEC4EQ9ULY5 219 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 PLXNA4Q9HCM2 1894 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 DYTNA2CJ06 578 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 MYO1GB0I1T2 1018 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 OPRL1P41146 370 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 SMAD3P84022 425 aaKnown RBP23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 SKIV2LQ15477 1246 aaKnown RBP23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 ZXDCQ2QGD7 858 aaPredicted RBP23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 PNPT1Q8TCS8 783 aaKnown RBP23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.412e-6■■■□□ 15.6
SPTSSA-201ENST00000298130 COX4I2Q96KJ9 171 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 TUBA1CQ9BQE3 449 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 PARVBQ9HBI1 364 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 SELENONQ9NZV5 590 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 COQ6Q9Y2Z9 468 aa23.83■■□□□ 1.41
SPTSSA-201ENST00000298130 ISL1P61371 349 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 FPGSQ05932 587 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 CCDC81Q6ZN84 652 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 ZSWIM9Q86XI8 627 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 CDC26Q8NHZ8 85 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 NRBF2Q96F24 287 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 PDLIM5Q96HC4 596 aaKnown RBP23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 EBPLQ9BY08 206 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 RIBC2Q9H4K1 309 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 CLMPQ9H6B4 373 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 PCDH10Q9P2E7 1040 aa23.83■■□□□ 1.4
SPTSSA-201ENST00000298130 SLC1A7O00341 560 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 PGLSO95336 258 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 EPB42P16452 691 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 GSTM2P28161 218 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 DGCR6Q14129 220 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 SAPCD2Q86UD0 394 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 RBFAQ8N0V3 343 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 HDAC2Q92769 488 aaKnown RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 TTLL2Q9BWV7 592 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 RAD21L1Q9H4I0 556 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 TRPM5Q9NZQ8 1165 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 TMEFF2Q9UIK5 374 aaPredicted RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 GNPTGQ9UJJ9 305 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 PCDHB1Q9Y5F3 818 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 hCG_2039718K7EN88 272 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 DGKAP23743 735 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CD300CQ08708 224 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CDH18Q13634 790 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CYP2A13Q16696 494 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 USP39Q53GS9 565 aaKnown RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CARD16Q5EG05 197 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CEP68Q76N32 757 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 UBE2FQ969M7 185 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 CCDC115Q96NT0 180 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 RBM4BQ9BQ04 359 aaKnown RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 RBM4Q9BWF3 364 aaKnown RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 DCAF13Q9NV06 445 aaKnown RBP23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 ABCG2Q9UNQ0 655 aa23.82■■□□□ 1.4
SPTSSA-201ENST00000298130 TRIM64BA6NI03 449 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 PER2O15055 1255 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 CD9P21926 228 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 EPHA2P29317 976 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 RAD23AP54725 363 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 GP2P55259 537 aaKnown RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 CBX2Q14781 532 aaPredicted RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 SMN1Q16637 294 aaKnown RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 RBM48Q5RL73 367 aaKnown RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 LAIR1Q6GTX8 287 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 GRAMD4Q6IC98 578 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 SLC16A12Q6ZSM3 486 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 TRIM74Q86UV6 250 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 TRIM73Q86UV7 250 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 DCP2Q8IU60 420 aaKnown RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 EID3Q8N140 333 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 RAB2BQ8WUD1 216 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 SELENOMQ8WWX9 145 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 FKBP10Q96AY3 582 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 NMRK2Q9NPI5 230 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 ARL15Q9NXU5 204 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 CLPXO76031 633 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 JUNBP17275 347 aaPredicted RBP23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 EPORP19235 508 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 MSH3P20585 1137 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 IDUAP35475 653 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 GSSP48637 474 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 GPNMBQ14956 572 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 PERM1Q5SV97 790 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 DOK6Q6PKX4 331 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 RNF180Q86T96 592 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 IGFN1Q86VF2 1251 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 CYP4Z1Q86W10 505 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 TMCO5AQ8N6Q1 288 aa23.81■■□□□ 1.4
SPTSSA-201ENST00000298130 ABHD11Q8NFV4 315 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms