RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 OCIAD1Q9NX40 245 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CORO1CQ9ULV4 474 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TDRKHQ9Y2W6 561 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 UTP11Q9Y3A2 253 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 APC2O95996 2303 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 E5RI56 91 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 H3BMM5 538 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ESR1P03372 595 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 FGF3P11487 239 aaPredicted RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 PKMP14618 531 aaKnown RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 CCND1P24385 295 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ACADLP28330 430 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 SLC5A2P31639 672 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 PRKAA1Q13131 559 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF789Q5FWF6 425 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 CTSL3PQ5NE16 218 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 OOSP2Q86WS3 158 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 EGFL6Q8IUX8 553 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 CCDC63Q8NA47 563 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF248Q8NDW4 579 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 OR5AR1Q8NGP9 310 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 SKA2Q8WVK7 121 aaPredicted RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 FAM136AQ96C01 138 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 BIRC8Q96P09 236 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 SH3GL3Q99963 347 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 HGH1Q9BTY7 390 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 RAB33BQ9H082 229 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 SLC39A1Q9NY26 324 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 EPHA6Q9UF33 1036 aa11.75□□□□□ -0.53
HMGB2-201ENST00000296503 ZC3H7BQ9UGR2 993 aaKnown RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 MN1Q10571 1320 aaPredicted RBP11.75□□□□□ -0.53
HMGB2-201ENST00000296503 OR5K3A6NET4 321 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 CDRT15L2A8MXV6 281 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 NIPSNAP2O75323 286 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 GPC4O75487 556 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 F7P08709 466 aaPredicted RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ERVK-10P10266 1014 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 PAX7P23759 505 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 EIF2S3P41091 472 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 VRK3Q8IV63 474 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TBC1D21Q8IYX1 336 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 SLC22A15Q8IZD6 547 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 OR52E1Q8NGJ3 308 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 SNIP1Q8TAD8 396 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ART4Q93070 314 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 LRRC39Q96DD0 335 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TAAR9Q96RI9 348 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 FAM167BQ9BTA0 163 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 RAB17Q9H0T7 212 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 NOP53Q9NZM5 478 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 WHRNQ9P202 907 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 POLG2Q9UHN1 485 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 FBXO5Q9UKT4 447 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 EPG5Q9HCE0 2579 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ASPMQ8IZT6 3477 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TOX3O15405 576 aaPredicted RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 WFS1O76024 890 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 HAUS5O94927 633 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 SLC1A2P43004 574 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ARL4DP49703 201 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ADARP55265 1226 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 PPP1CAP62136 330 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 PLEKHS1Q5SXH7 462 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 DUPD1Q68J44 220 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 UNC5AQ6ZN44 842 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 CLEC14AQ86T13 490 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TEX9Q8N6V9 391 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TFB2MQ9H5Q4 396 aaKnown RBP11.74□□□□□ -0.53
HMGB2-201ENST00000296503 XKR8Q9H6D3 395 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 CDYLQ9Y232 598 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 PCDHGA7Q9Y5G6 932 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 TEX264Q9Y6I9 313 aa11.74□□□□□ -0.53
HMGB2-201ENST00000296503 GSAPA4D1B5 854 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 KDM1AO60341 852 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 PRAMEF10O60809 474 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 SLCO2B1O94956 709 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 HPDP32754 393 aaPredicted RBP11.73□□□□□ -0.53
HMGB2-201ENST00000296503 MPP1Q00013 466 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 FOXM1Q08050 763 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 SPRED3Q2MJR0 410 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 DCAF12Q5T6F0 453 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 TTC23LQ6PF05 361 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 AMIGO1Q86WK6 493 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 FBXO36Q8NEA4 188 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 OR5K2Q8NHB8 316 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 KCNE4Q8WWG9 221 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 CERS2Q96G23 380 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 NRTNQ99748 197 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 MAP3K3Q99759 626 aa11.73□□□□□ -0.53
HMGB2-201ENST00000296503 NSRP1Q9H0G5 558 aaKnown RBP11.73□□□□□ -0.53
HMGB2-201ENST00000296503 GALPQ9UBC7 116 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms