RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SLC15A4Q8N697 577 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 NSMCE3Q96MG7 304 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ERVK-6Q9BXR3 956 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ATG10Q9H0Y0 220 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 KAT8Q9H7Z6 458 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 LRTM1Q9HBL6 345 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 NUMBLQ9Y6R0 609 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 AURKAO14965 403 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SLC22A2O15244 555 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 RGS1Q08116 209 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 IL18R1Q13478 541 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SLC9A5Q14940 896 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 ANGPT1Q15389 498 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 C17orf64Q86WR6 236 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SLC15A3Q8IY34 581 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 AADATQ8N5Z0 425 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
HPS3-201ENST00000296051 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 C16orf70Q9BSU1 422 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 RPS6KA6Q9UK32 745 aa13.18□□□□□ -0.3
HPS3-201ENST00000296051 PSIP1O75475 530 aaKnown RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 SOD2P04179 222 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 ALPPL2P10696 532 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 ZNHIT3Q15649 155 aaPredicted RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 ANKDD1AQ495B1 522 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 TMEM53Q6P2H8 277 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 EIF3MQ7L2H7 374 aaKnown RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 KRT73Q86Y46 540 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 STON2Q8WXE9 905 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 C10orf71Q711Q0 1435 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 G3V2L1 256 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 UROSP10746 265 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 ADH5P11766 374 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 AKT2P31751 481 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 TALDO1P37837 337 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 CDC42P60953 191 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 ENPEPQ07075 957 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 SLC13A2Q13183 592 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 LIX1Q8N485 282 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 WDR36Q8NI36 951 aaKnown RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 EBPLQ9BY08 206 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 TUBA8Q9NY65 449 aaPredicted RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 A0A1B0GTW7 788 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 J3KR12 359 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 GRID2O43424 1007 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 HOXB2P14652 356 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 MYL12AP19105 171 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 CSKP41240 450 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 GPR17Q13304 367 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 FAM131AQ6UXB0 335 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 LILRA2Q8N149 483 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 POMGNT2Q8NAT1 580 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 SLC13A3Q8WWT9 602 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 KXD1Q9BQD3 176 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 ALKBH4Q9NXW9 302 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 MALT1Q9UDY8 824 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 MRPS33Q9Y291 106 aaKnown RBP13.17□□□□□ -0.3
HPS3-201ENST00000296051 LRP6O75581 1613 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
HPS3-201ENST00000296051 SGTAO43765 313 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 OR6A2O95222 327 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 PRAMEF1O95521 474 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 ARSFP54793 590 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 LY6G5CQ5SRR4 150 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 UBE2R2Q712K3 238 aaPredicted RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 PDPRQ8NCN5 879 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 LCN9Q8WX39 176 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 GTPBP3Q969Y2 492 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 PCYT2Q99447 389 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 NAA50Q9GZZ1 169 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 INTS10Q9NVR2 710 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 SLC9A8Q9Y2E8 581 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SUV39H1O43463 412 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 ATG13O75143 517 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 EPORP19235 508 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 FEN1P39748 380 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 GRIA2P42262 883 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 GDF5P43026 501 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 RPL26P61254 145 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 CYP4Z1Q86W10 505 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 CMTR2Q8IYT2 770 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 SCAIQ8N9R8 606 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 C1GALT1C1Q96EU7 318 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms