RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC51AQ86UW1 340 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 C12orf66Q96MD2 445 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 SRRDQ9UH36 339 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 RPL36Q9Y3U8 105 aaKnown RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 OR51F1A6NGY5 319 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 C9JVG2 144 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 H0YGN5 161 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 J3KR12 359 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 hCG_2039718K7EN88 272 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 RPLP0P05388 317 aaKnown RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ATP1B2P14415 290 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CPN2P22792 545 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 DNAJA1P31689 397 aaKnown RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 GMFBP60983 142 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MYLK3Q32MK0 819 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 FRG2Q64ET8 278 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 FAAH2Q6GMR7 532 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TPRG1Q6ZUI0 275 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 OR52J3Q8NH60 311 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ING5Q8WYH8 240 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 FRG2BQ96QU4 278 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 NFS1Q9Y697 457 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ALPPP05187 535 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MPIP34949 423 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MNDAP41218 407 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 AVPR1BP47901 424 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CCT3P49368 545 aaKnown RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 KCNC3Q14003 757 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CCNIQ14094 377 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 DCAF4L2Q8NA75 395 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TUBGCP5Q96RT8 1024 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 GIMD1P0DJR0 217 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 STC1P52823 247 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 AP3S2P59780 193 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 SCARB2Q14108 478 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 PDCD4Q53EL6 469 aaKnown RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 XKR4Q5GH76 650 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 SLC25A24Q6NUK1 477 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TMEM214Q6NUQ4 689 aaKnown RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ATG14Q6ZNE5 492 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 RAB43Q86YS6 212 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TMEM126BQ8IUX1 230 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 RGMAQ96B86 450 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 EXO5Q9H790 373 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TXNRD2Q9NNW7 524 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 NLE1Q9NVX2 485 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CLDN25C9JDP6 229 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ENPP3O14638 875 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 AP2A2O94973 939 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MATN4O95460 622 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 EBLN1P0CF75 366 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 SCN1BQ07699 218 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 MSS51Q4VC12 460 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CILP2Q8IUL8 1156 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TSPEARQ8WU66 669 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 SNX33Q8WV41 574 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ESAMQ96AP7 390 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 SHISA4Q96DD7 197 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 CMTM7Q96FZ5 175 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF570Q96NI8 536 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 C1QTNF1Q9BXJ1 281 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TAS2R7Q9NYW3 318 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 TOPAZ1Q8N9V7 1692 aa12.53□□□□□ -0.4
PTCD1-201ENST00000292478 NEMP2A6NFY4 417 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 ARPC2O15144 300 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 TFPIP10646 304 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF12P17014 697 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 CHRNA6Q15825 494 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 USP43Q70EL4 1123 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.52□□□□□ -0.4
PTCD1-201ENST00000292478 HDDC3Q8N4P3 179 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.4
PTCD1-201ENST00000292478 FAM156AQ8NDB6 213 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 HBEGFQ99075 208 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 FLRT1Q9NZU1 646 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 ZDHHC2Q9UIJ5 367 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 INSL6Q9Y581 213 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 GPC6Q9Y625 555 aaPredicted RBP12.52□□□□□ -0.4
PTCD1-201ENST00000292478 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.4
PTCD1-201ENST00000292478 EDDM13A0A1B0GTR0 161 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 TIE1P35590 1138 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 C1QTNF8P60827 252 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 KLF1Q13351 362 aaPredicted RBP12.52□□□□□ -0.4
PTCD1-201ENST00000292478 IL18Q14116 193 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 TRPV3Q8NET8 790 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 OR52B2Q96RD2 323 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms