RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 OR2T29Q8NH02 315 aa13.36□□□□□ -0.27
TRAPPC10-201ENST00000291574 GPR22Q99680 433 aa13.36□□□□□ -0.27
TRAPPC10-201ENST00000291574 WRAP53Q9BUR4 548 aaKnown RBP13.36□□□□□ -0.27
TRAPPC10-201ENST00000291574 SLC22A4Q9H015 551 aa13.36□□□□□ -0.27
TRAPPC10-201ENST00000291574 PCDHGA11Q9Y5H2 935 aa13.36□□□□□ -0.27
TRAPPC10-201ENST00000291574 RFPL1O75677 317 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 HFE2Q6ZVN8 426 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 ZNF563Q8TA94 476 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 PIGXQ8TBF5 258 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CDKN2AIPNLQ96HQ2 116 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 FBXW2Q9UKT8 454 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 FGF3P11487 239 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 GRB14Q14449 540 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 TMEM110Q86TL2 294 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 BARD1Q99728 777 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 SMIM30A4D0T7 59 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 WWP2O00308 870 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 PER2O15055 1255 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 ERN1O75460 977 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 DNAJA1P31689 397 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 TUBA4AP68366 448 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 NFKB2Q00653 900 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 SCRN3Q0VDG4 424 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CHST4Q8NCG5 386 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CCDC177Q9NQR7 707 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 PCDHGA3Q9Y5H0 932 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CCNDBP1O95273 360 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 SLC2A2P11168 524 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CDH4P55283 916 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CREB5Q02930 508 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 TAF1AQ15573 450 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 SWI5Q1ZZU3 235 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CLEC12AQ5QGZ9 265 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 KIAA1161Q6NSJ0 714 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 ISOC1Q96CN7 298 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 PPEF2O14830 753 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 ENGP17813 658 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CRB2Q5IJ48 1285 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 MINDY2Q8NBR6 621 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 TSEN15Q8WW01 171 aaKnown RBP13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
TRAPPC10-201ENST00000291574 CNTRLQ7Z7A1 2325 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 A0A0G2JN53 185 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 GNAZP19086 355 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RPS24P62847 133 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 PPP1R3AQ16821 1122 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RPL36Q9Y3U8 105 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ARL5CA6NH57 179 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 OR1F1O43749 312 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 PKP4Q99569 1192 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RNF208Q9H0X6 261 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RPF2Q9H7B2 306 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 A0A1W2PP18 115 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 HCRTO43612 131 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 NT5EP21589 574 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 GDF5P43026 501 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 OR5AK3PQ8NH89 298 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RELTQ969Z4 430 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 MUS81Q96NY9 551 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 MIPEPQ99797 713 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 BOLA2-SMG1P6H3BVE0 249 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 IRAK2O43187 625 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ITIH1P19827 911 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 TLR1Q15399 786 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 GALNTL5Q7Z4T8 443 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ZNF347Q96SE7 839 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 MNTQ99583 582 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ITPAQ9BY32 194 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 G6PDP11413 515 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 CPN2P22792 545 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ELK4P28324 431 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ECHS1P30084 290 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 NSG1P42857 185 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 RPL26P61254 145 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 SMCO1Q147U7 214 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 TSTQ16762 297 aaKnown RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 C17orf50Q8WW18 174 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 OR8D1Q8WZ84 308 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 PEBP4Q96S96 227 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 C12orf4Q9NQ89 552 aa13.34□□□□□ -0.27
TRAPPC10-201ENST00000291574 A0A0X1KG70 313 aa13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 A8MV72 311 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 GLUD1P00367 558 aa13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 SLC6A4P31645 630 aa13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 CLCN4P51793 760 aa13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 ZNF404Q494X3 552 aa13.33□□□□□ -0.27
TRAPPC10-201ENST00000291574 LINGO2Q7L985 606 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms