RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KRT87PA6NCN2 255 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 GOLGA8NF8WBI6 632 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 YKT6O15498 198 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PHGDHO43175 533 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PLIN3O60664 434 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 RASGRP1O95267 797 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 MATN4O95460 622 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CD38P28907 300 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 ABCG1P45844 678 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CTBSQ01459 385 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PAQR3Q6TCH7 311 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 Q6ZSR6 202 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PDZD3Q86UT5 571 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 AMZ2Q86W34 360 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC22A9Q8IVM8 553 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC22A18ASQ8N1D0 253 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CEP76Q8TAP6 659 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 KLHDC7BQ96G42 594 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 ARHGAP9Q9BRR9 750 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 ACTR8Q9H981 624 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 FZD3Q9NPG1 666 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 OR1A2Q9Y585 309 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 HEBP2Q9Y5Z4 205 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CPED1A4D0V7 1026 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 TARM1B6A8C7 271 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 KLF11O14901 512 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PSIP1O75475 530 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 TNFP01375 233 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CCDC166P0CW27 439 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC2A4P14672 509 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 BCKDHBP21953 392 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 TCEA1P23193 301 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 RPA3P35244 121 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 SRP54P61011 504 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 AMZ1Q400G9 498 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 N4BP2L1Q5TBK1 243 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 BEND7Q8N7W2 519 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 TCP10LQ8TDR4 215 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 LINGO1Q96FE5 620 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 RUVBL2Q9Y230 463 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 BPTFQ12830 3046 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 ISM1B1AKI9 464 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 RPN2P04844 631 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 F7P08709 466 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 NXPH1P58417 271 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 FOXM1Q08050 763 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 DLG1Q12959 904 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PPM1JQ5JR12 505 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 METRNLQ641Q3 311 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CYHR1Q6ZMK1 362 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CLDN19Q8N6F1 224 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 KCTD4Q8WVF5 259 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 RNF31Q96EP0 1072 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 ELAC2Q9BQ52 826 aaKnown RBP8.23□□□□□ -1.09
PTPDC1-201ENST00000288976 CACNA1AO00555 2505 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GFYI3L273 518 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ZW10O43264 779 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 AFF3P51826 1226 aaKnown RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF460Q14592 562 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PLK5Q496M5 336 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF648Q5T619 568 aaPredicted RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 KRT80Q6KB66 452 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 FANCMQ8IYD8 2048 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 FSTL5Q8N475 847 aaPredicted RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM151AQ8N4L1 468 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 AVL9Q8NBF6 648 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GPBAR1Q8TDU6 330 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 KLHL29Q96CT2 875 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC30A3Q99726 388 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 C1QTNF3Q9BXJ4 246 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CAPS2Q9BXY5 557 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 KCNH6Q9H252 994 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 OR52A5Q9H2C5 316 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GALPQ9UBC7 116 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 INVSQ9Y283 1065 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM98Q9Y2Y6 226 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 C5orf42Q9H799 3197 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 A0A1B0GTW7 788 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 POM121BA6NF01 834 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 OR2AG2A6NM03 316 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 H0Y3Z8 333 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 H3BM21 787 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 THEGLP0DJG4 465 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GNSP15586 552 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CHN1P15882 459 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ALAS2P22557 587 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 FZD2Q14332 565 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ANGPT1Q15389 498 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PPP1R3AQ16821 1122 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CRTC3Q6UUV7 619 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ISCA2Q86U28 154 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ANKRD49Q8WVL7 239 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms