RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PKD1L2Q7Z442 2459 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 ISM1B1AKI9 464 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 STK17BO94768 372 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 UGT2B7P16662 529 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 CCNFP41002 786 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 PLTPP55058 493 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 MANEAQ5SRI9 462 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 TEDDM1Q5T9Z0 273 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 CAPN12Q6ZSI9 719 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 VASH2Q86V25 355 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 PPP1R3BQ86XI6 285 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 RAB42Q8N4Z0 105 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 IL22RA1Q8N6P7 574 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 GIMAP7Q8NHV1 300 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 MAGEC3Q8TD91 643 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 RAD51AP1Q96B01 352 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 IL17FQ96PD4 163 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 ULBP3Q9BZM4 244 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 FGF21Q9NSA1 209 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 MED16Q9Y2X0 877 aa24.33■■□□□ 1.49
PDF-201ENST00000288022 SDK2Q58EX2 2172 aa24.33■■□□□ 1.48
PDF-201ENST00000288022 ZZEF1O43149 2961 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 RAD1O60671 282 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 AHSGP02765 367 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 FGF5P12034 268 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 PVRP15151 417 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 ST6GAL1P15907 406 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 SLC7A5Q01650 507 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 CAV1Q03135 178 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 GRB7Q14451 532 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 GPR19Q15760 415 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 CCDC81Q6ZN84 652 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 TRIM73Q86UV7 250 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 TAX1BP1Q86VP1 789 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 CACNA2D3Q8IZS8 1091 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 C2orf73Q8N5S3 287 aaPredicted RBP24.32■■□□□ 1.48
PDF-201ENST00000288022 PYROXD1Q8WU10 500 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 INPP5DQ92835 1189 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 NKD1Q969G9 470 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 OR2A14Q96R47 310 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 RAB11FIP5Q9BXF6 653 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 PITPNM3Q9BZ71 974 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 ZFATQ9P243 1243 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 KLHL42Q9P2K6 505 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 TRMT6Q9UJA5 497 aaKnown RBP24.32■■□□□ 1.48
PDF-201ENST00000288022 PILRAQ9UKJ1 303 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 BTRCQ9Y297 605 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 DHRS7Q9Y394 339 aa24.32■■□□□ 1.48
PDF-201ENST00000288022 RASGRF2O14827 1237 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 MATN4O95460 622 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 CD9P21926 228 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 GABRB3P28472 473 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 MGAT5Q09328 741 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 FRG1Q14331 258 aaKnown RBP24.31■■□□□ 1.48
PDF-201ENST00000288022 KIR2DS3Q14952 304 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 CCSMST1Q4G0I0 132 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 UGT3A1Q6NUS8 523 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 PALM2Q8IXS6 379 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 NLGN4XQ8N0W4 816 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 LMNTD1Q8N9Z9 388 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 MNS1Q8NEH6 495 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 NLGN4YQ8NFZ3 816 aaPredicted RBP24.31■■□□□ 1.48
PDF-201ENST00000288022 OR2L8Q8NGY9 312 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 KIF18AQ8NI77 898 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 CD200R1Q8TD46 325 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 TRAPPC9Q96Q05 1148 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 LRRC1Q9BTT6 524 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 LNPEPQ9UIQ6 1025 aa24.31■■□□□ 1.48
PDF-201ENST00000288022 TMEM184BQ9Y519 407 aaPredicted RBP24.31■■□□□ 1.48
PDF-201ENST00000288022 EIF3HO15372 352 aaKnown RBP eCLIP24.3■■□□□ 1.48
PDF-201ENST00000288022 SPAG6O75602 509 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 TUBB4BP68371 445 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 SRSF6Q13247 344 aaKnown RBP24.3■■□□□ 1.48
PDF-201ENST00000288022 TUBB2AQ13885 445 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 TRADDQ15628 312 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.3■■□□□ 1.48
PDF-201ENST00000288022 RBM20Q5T481 1227 aaKnown RBP24.3■■□□□ 1.48
PDF-201ENST00000288022 ARHGAP40Q5TG30 622 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 NEK10Q6ZWH5 1172 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 CCDC25Q86WR0 208 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 SPNS2Q8IVW8 549 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 CPNE9Q8IYJ1 553 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 LINC01555Q8NAE3 123 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 MENTQ9BUN1 341 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 TUBB2BQ9BVA1 445 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 PRORYQ9H606 182 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 FANCEQ9HB96 536 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 FAM114A2Q9NRY5 505 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 TAS2R13Q9NYV9 303 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 SSUH2Q9Y2M2 353 aa24.3■■□□□ 1.48
PDF-201ENST00000288022 CELSR3Q9NYQ7 3312 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 A0A0J9YY10 115 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 KRT87PA6NCN2 255 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 KIAA0754O94854 1291 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 CATP04040 527 aaKnown RBP24.29■■□□□ 1.48
PDF-201ENST00000288022 CBSLP0DN79 551 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 ENO3P13929 434 aaPredicted RBP24.29■■□□□ 1.48
PDF-201ENST00000288022 ZNF28P17035 718 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 MCM3P25205 808 aa24.29■■□□□ 1.48
PDF-201ENST00000288022 PEBP1P30086 187 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms