RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 TNS1Q9HBL0 1735 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 A0A0A6YYC8 382 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 I3L1I5 382 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 NDUFA10O95299 355 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TPM3P06753 285 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TACR3P29371 465 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 NMT1P30419 496 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 ARFIP1P53367 373 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 ACTR3P61158 418 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TGFB2P61812 414 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CYP4F2P78329 520 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 GPC5P78333 572 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 SP2Q02086 613 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CYP1B1Q16678 543 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CERKLQ49MI3 558 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 C9orf50Q5SZB4 431 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 FAM46CQ5VWP2 391 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CWC27Q6UX04 472 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 Q6ZUG5 572 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TMPRSS11FQ6ZWK6 438 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CENPSQ8N2Z9 138 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 OR10T2Q8NGX3 314 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 OR8K3Q8NH51 312 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 U2AF1L4Q8WU68 220 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 OR2A14Q96R47 310 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 GPHA2Q96T91 129 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 HIPK3Q9H422 1215 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 SCPEP1Q9HB40 452 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TM9SF3Q9HD45 589 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 DNAJC11Q9NVH1 559 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 OAZ3Q9UMX2 235 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 NCKAP1Q9Y2A7 1128 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 LAMB4A4D0S4 1761 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 LTN1O94822 1766 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 SPATA31A6Q5VVP1 1343 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 RNF123Q5XPI4 1314 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 XKRY2A2RUG3 117 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 C17orf102A2RUQ5 167 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 DRGXA6NNA5 263 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 MAP2K7O14733 419 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 ADAMDEC1O15204 470 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 MAPK13O15264 365 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 MED7O43513 233 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 XRCC3O43542 346 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 PDE9AO76083 593 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 PTBP3O95758 552 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 AGTP01019 485 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 C9P02748 559 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 CSF2P04141 144 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 ZNF888P0CJ79 500 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 DLATP10515 647 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 CXADRP78310 365 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 GPS2Q13227 327 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 SGCBQ16585 318 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 MCMDC2Q4G0Z9 681 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 C6orf10Q5SRN2 563 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 MFSD12Q6NUT3 480 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 SCYL2Q6P3W7 929 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 LRRC57Q8N9N7 239 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 BHLHE23Q8NDY6 225 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 OR1J2Q8NGS2 313 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 C9orf43Q8TAL5 461 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 FAM46BQ96A09 425 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 DAZAP1Q96EP5 407 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 TRMT61AQ96FX7 289 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 COQ10AQ96MF6 247 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 AGAP3Q96P47 875 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 FCRL4Q96PJ5 515 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 URM1Q9BTM9 101 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 FSD1LQ9BXM9 530 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 TMEM245Q9H330 911 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 DENND2DQ9H6A0 471 aaPredicted RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 EQTNQ9NQ60 294 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 RAB20Q9NX57 234 aa2.69□□□□□ -1.98
CHD1-201ENST00000284049 HBS1LQ9Y450 684 aaKnown RBP2.69□□□□□ -1.98
CHD1-201ENST00000284049 CEMIPQ8WUJ3 1361 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 KIF13BQ9NQT8 1826 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 RNMTO43148 476 aaKnown RBP2.68□□□□□ -1.98
CHD1-201ENST00000284049 ITM2AO43736 263 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 TLX2O43763 284 aaPredicted RBP2.68□□□□□ -1.98
CHD1-201ENST00000284049 ADAP00813 363 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 DLSTP36957 453 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 FNTAP49354 379 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 MRPS34P82930 218 aaKnown RBP2.68□□□□□ -1.98
CHD1-201ENST00000284049 COG7P83436 770 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 MC2RQ01718 297 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 MBTD1Q05BQ5 628 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 TRA2AQ13595 282 aaKnown RBP eCLIP2.68□□□□□ -1.983e-6■■□□□ 12.3
CHD1-201ENST00000284049 HLXQ14774 488 aaPredicted RBP2.68□□□□□ -1.98
CHD1-201ENST00000284049 NONOQ15233 471 aaKnown RBP eCLIP2.68□□□□□ -1.98
CHD1-201ENST00000284049 FAM174BQ3ZCQ3 159 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 PRAMEF8Q5VWM4 474 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 AP1ARQ63HQ0 302 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 KCNIP4Q6PIL6 250 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 PAPD4Q6PIY7 484 aaKnown RBP2.68□□□□□ -1.98
CHD1-201ENST00000284049 DOK6Q6PKX4 331 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 AQP12AQ8IXF9 295 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 IP6K1Q92551 441 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 RAB7BQ96AH8 199 aa2.68□□□□□ -1.98
CHD1-201ENST00000284049 CCDC51Q96ER9 411 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms