RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCBE1Q6UXH8 406 aaPredicted RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 MBOAT1Q6ZNC8 495 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF486Q96H40 463 aaPredicted RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 HOXD1Q9GZZ0 328 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GORASP2Q9H8Y8 452 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF236Q9UL36 1845 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 A0A1W2PQ67 120 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 MGEA5O60502 916 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 NBNO60934 754 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GUCY1B2O75343 617 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 MSH3P20585 1137 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 AQP1P29972 269 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CDKN2CP42773 168 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 DGKEP52429 567 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GRIK2Q13002 908 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 FXNQ16595 210 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CPSF6Q16630 551 aaKnown RBP eCLIP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 UMODL1-AS1Q8N2C9 162 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CLDN19Q8N6F1 224 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 TTC9BQ8N6N2 239 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CD200R1Q8TD46 325 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 C17orf50Q8WW18 174 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 Q96MT0 163 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 DCAF13Q9NV06 445 aaKnown RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CCL15-CCL14A0A0B4J2E2 113 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 ABCB1P08183 1280 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 ODC1P11926 461 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 BMP1P13497 986 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CRISP3P54108 245 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CASP9P55211 416 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 EIF4EBP2Q13542 120 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CCL15Q16663 113 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CPZQ66K79 652 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 RASAL3Q86YV0 1011 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 NLGN4XQ8N0W4 816 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 TPD52L3Q96J77 140 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 DPH2Q9BQC3 489 aaPredicted RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CHCHD6Q9BRQ6 235 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 USE1Q9NZ43 259 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 A8MX80 341 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 NUAK1O60285 661 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 FGF1P05230 155 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 GRK5P34947 590 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 PHC1P78364 1004 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 UPP1Q16831 310 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 TMC5Q6UXY8 1006 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 NKAPQ8N5F7 415 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 OR8J3Q8NGG0 315 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 RDH12Q96NR8 316 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 KCNC2Q96PR1 638 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 CEP44Q9C0F1 390 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 RNF38Q9H0F5 515 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 HEBP1Q9NRV9 189 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 ADARB2Q9NS39 739 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 ERVK13-1Q9NX77 482 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
COL8A1-202ENST00000273342 SAMHD1Q9Y3Z3 626 aaKnown RBP12.63□□□□□ -0.39
COL8A1-202ENST00000273342 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 NDST3O95803 873 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 RHOQP17081 205 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ACOX1Q15067 660 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TPRG1LQ5T0D9 272 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ZCCHC8Q6NZY4 707 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 DOK6Q6PKX4 331 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 USP43Q70EL4 1123 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 CCDC71Q8IV32 467 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 METTL4Q8N3J2 472 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 PYURFQ96I23 114 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 EGLN2Q96KS0 407 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 SERPINB11Q96P15 392 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF382Q96SR6 550 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 KCNS3Q9BQ31 491 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 OR51E2Q9H255 320 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 DUSP21Q9H596 190 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 TAS2R16Q9NYV7 291 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF490Q9ULM2 529 aaPredicted RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 IFT52Q9Y366 437 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 BRCA1P38398 1863 aaKnown RBP12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ARNTLO00327 626 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 STX16O14662 325 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 AREL1O15033 823 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 PCDHGA12O60330 932 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 KRT8P05787 483 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 RYKP34925 604 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 CASP3P42574 277 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 ARHGDIAP52565 204 aa12.62□□□□□ -0.39
COL8A1-202ENST00000273342 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms