RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 TRIM39Q9HCM9 518 aa17.4■□□□□ 0.38
SEC22C-202ENST00000273156 CNOT6Q9ULM6 557 aaKnown RBP17.4■□□□□ 0.38
SEC22C-202ENST00000273156 GOLGA4Q13439 2230 aaKnown RBP17.4■□□□□ 0.38
SEC22C-202ENST00000273156 ARID1BQ8NFD5 2236 aaPredicted RBP17.4■□□□□ 0.38
SEC22C-202ENST00000273156 A0A0G2JND7 137 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 UBXN8O00124 270 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 CACNB4O00305 520 aaPredicted RBP17.39■□□□□ 0.38
SEC22C-202ENST00000273156 CDK14O94921 469 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 KITP10721 976 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 MTHFD2P13995 350 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 CTSEP14091 401 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 HK3P52790 923 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 IFT88Q13099 833 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 GTF2H3Q13889 308 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 NR0B2Q15466 257 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 KHDC1Q4VXA5 237 aaKnown RBP17.39■□□□□ 0.38
SEC22C-202ENST00000273156 FRA10AC1Q70Z53 315 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 FBXO39Q8N4B4 442 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 RASGEF1AQ8N9B8 481 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 RFWD2Q8NHY2 731 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 C10orf82Q8WW14 230 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 NAT6Q93015 286 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 L3HYPDHQ96EM0 354 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 EML4Q9HC35 981 aaKnown RBP17.39■□□□□ 0.38
SEC22C-202ENST00000273156 KCNK4Q9NYG8 393 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 DOLKQ9UPQ8 538 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.39■□□□□ 0.38
SEC22C-202ENST00000273156 RAP2CQ9Y3L5 183 aa17.39■□□□□ 0.38
SEC22C-202ENST00000273156 ACACAQ13085 2346 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 SNX2O60749 519 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 MT-CO3P00414 261 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 NAA20P61599 178 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 HERVK_113P63132 956 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 PRKAA1Q13131 559 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 RTP5Q14D33 572 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 PFKFB4Q16877 469 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 DEFB133Q30KQ1 61 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ARL13AQ5H913 290 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ZNF648Q5T619 568 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-202ENST00000273156 PNCKQ6P2M8 343 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 TMEM220Q6QAJ8 160 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 C6orf89Q6UWU4 347 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ADAMTSL4Q6UY14 1074 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 MARCH9Q86YJ5 346 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 PTGR2Q8N8N7 351 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-202ENST00000273156 WDR48Q8TAF3 677 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ASZ1Q8WWH4 475 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ELMO1Q92556 727 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 HIC2Q96JB3 615 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ZNF514Q96K75 400 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-202ENST00000273156 WDR92Q96MX6 357 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 TMEM237Q96Q45 408 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 DEPDC7Q96QD5 511 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 TRMOQ9BU70 441 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 LRRC61Q9BV99 259 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 ERVK-6Q9BXR3 956 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 KLQ9UEF7 1012 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 IKZF3Q9UKT9 509 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 CFAP47Q6ZTR5 3102 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 DOCK9Q9BZ29 2069 aa17.39■□□□□ 0.37
SEC22C-202ENST00000273156 DSPP15924 2871 aaKnown RBP17.38■□□□□ 0.37
SEC22C-202ENST00000273156 TP53BP1Q12888 1972 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-202ENST00000273156 APC2O95996 2303 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 FAM208BQ5VWN6 2430 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 OR2AG2A6NM03 316 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 TNFRSF10CO14798 259 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 SGTAO43765 313 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 VEGFDO43915 354 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 KLK8O60259 260 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 PCCBP05166 539 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 PRLHRP49683 370 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 HK2P52789 917 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 KIAA1024LP59773 190 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 SRP54P61011 504 aaKnown RBP17.38■□□□□ 0.37
SEC22C-202ENST00000273156 HSPA14Q0VDF9 509 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 ZNF678Q5SXM1 525 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 C6orf132Q5T0Z8 1188 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 ENPP7Q6UWV6 458 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 CYHR1Q6ZMK1 362 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 GKN2Q86XP6 184 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 HID1Q8IV36 788 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 PELI3Q8N2H9 469 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 IFI44Q8TCB0 444 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 MAPK15Q8TD08 544 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 CCM2Q9BSQ5 444 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 NUDT4Q9NZJ9 180 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 CD274Q9NZQ7 290 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 MARCOQ9UEW3 520 aaPredicted RBP17.38■□□□□ 0.37
SEC22C-202ENST00000273156 OR1A2Q9Y585 309 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 AK5Q9Y6K8 562 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 DGKBQ9Y6T7 804 aa17.38■□□□□ 0.37
SEC22C-202ENST00000273156 EME2A4GXA9 379 aaPredicted RBP17.37■□□□□ 0.37
SEC22C-202ENST00000273156 STX16-NPEPL1H3BU86 382 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 STX16O14662 325 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 YY2O15391 372 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 NUAK1O60285 661 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 DCTN3O75935 186 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 SUPT7LO94864 414 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 TNFP01375 233 aa17.37■□□□□ 0.37
SEC22C-202ENST00000273156 S100BP04271 92 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms