RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 OTCP00480 354 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 GBX1Q14549 363 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 KCNJ8Q15842 424 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CPSF6Q16630 551 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 PSD4Q8NDX1 1056 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 PYCR2Q96C36 320 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 TSSK3Q96PN8 268 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 CRISPLD1Q9H336 500 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 KAT8Q9H7Z6 458 aaKnown RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 ITM2CQ9NQX7 267 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 NUDT4Q9NZJ9 180 aa17.58■□□□□ 0.4
TRAF4-201ENST00000262395 AGO1Q9UL18 857 aaKnown RBP17.58■□□□□ 0.4
TRAF4-201ENST00000262395 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 SCELO95171 688 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 DAPP51397 102 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 SGSHP51688 502 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 FAM110CQ1W6H9 321 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 PTRHD1Q6GMV3 140 aaKnown RBP17.57■□□□□ 0.4
TRAF4-201ENST00000262395 FAM151BQ6UXP7 276 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 CHPFQ8IZ52 775 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 OR6Q1Q8NGQ2 317 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 KCNJ9Q92806 393 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 PPP3R2Q96LZ3 170 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 TRIT1Q9H3H1 467 aaKnown RBP17.57■□□□□ 0.4
TRAF4-201ENST00000262395 AMBNQ9NP70 447 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 GMPPBQ9Y5P6 360 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 ANKRD66B4E2M5 251 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 LOC730098B7Z3J9 87 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 ALPIP09923 528 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 NEK2P51955 445 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 FOXD4Q12950 439 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-201ENST00000262395 PLEKHG7Q6ZR37 379 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 AHSA2Q719I0 299 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 AADATQ8N5Z0 425 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 Q8N9G6 341 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-201ENST00000262395 PIK3C3Q8NEB9 887 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 OR6K2Q8NGY2 324 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 ITPKCQ96DU7 683 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 DACH2Q96NX9 599 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 PSKH2Q96QS6 385 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 ASPSCR1Q9BZE9 553 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 SIAEQ9HAT2 523 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 WWOXQ9NZC7 414 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 SCHIP1Q9P0W5 487 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-201ENST00000262395 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.57■□□□□ 0.42e-9■■■■■ 40.4
TRAF4-201ENST00000262395 DLGAP4Q9Y2H0 992 aa17.57■□□□□ 0.4
TRAF4-201ENST00000262395 SLC22A1O15245 554 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 RGS14O43566 566 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 FAM20BO75063 409 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 ULK1O75385 1050 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 EFNA1P20827 205 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-201ENST00000262395 HOXC8P31273 242 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 VTCN1Q7Z7D3 282 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 GPR149Q86SP6 731 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 DYNC2LI1Q8TCX1 351 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 PYURFQ96I23 114 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 LRTM1Q9HBL6 345 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 NAALAD2Q9Y3Q0 740 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 CCDC159P0C7I6 412 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 GNPDA1P46926 289 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 FAM189BP81408 668 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 HIST2H2ACQ16777 129 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-201ENST00000262395 CACHD1Q5VU97 1274 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 CPZQ66K79 652 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 RASAL3Q86YV0 1011 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 PLD3Q8IV08 490 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 S100ZQ8WXG8 99 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 VMP1Q96GC9 406 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 ZNF641Q96N77 438 aaPredicted RBP17.56■□□□□ 0.4
TRAF4-201ENST00000262395 C1orf109Q9NX04 203 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 PCDHB8Q9UN66 801 aa17.56■□□□□ 0.4
TRAF4-201ENST00000262395 NBNO60934 754 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 PABPC1P11940 636 aaKnown RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 TACR1P25103 407 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 SEMG2Q02383 582 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 PCBP2Q15366 365 aaKnown RBP eCLIP17.55■□□□□ 0.44e-7■■■□□ 17.9
TRAF4-201ENST00000262395 COLEC12Q5KU26 742 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 Q6ZPB1 254 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 ZNF551Q7Z340 670 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 DENND1CQ8IV53 801 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 ULK4Q96C45 1275 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 EID2BQ96D98 161 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 LGALS12Q96DT0 336 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 YIPF6Q96EC8 236 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 EGLN2Q96KS0 407 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 ZNF300Q96RE9 604 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 BTBD2Q9BX70 525 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 ZBTB20Q9HC78 741 aaPredicted RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 GPRC5BQ9NZH0 403 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 AFF4Q9UHB7 1163 aaKnown RBP17.55■□□□□ 0.4
TRAF4-201ENST00000262395 PCDHB9Q9Y5E1 797 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 PCDHB5Q9Y5E4 795 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 PRSS21Q9Y6M0 314 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 LAMA3Q16787 3333 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 TTC34A8MYJ7 566 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 SLC16A6O15403 523 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 BCKDHAP12694 445 aa17.55■□□□□ 0.4
TRAF4-201ENST00000262395 CD36P16671 472 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms