RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PLCZ1Q86YW0 608 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MINDY2Q8NBR6 621 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MFSD3Q96ES6 412 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 ZNF285Q96NJ3 590 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 MKKSQ9NPJ1 570 aaPredicted RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 FARSBQ9NSD9 589 aaKnown RBP14.04□□□□□ -0.16
CUX2-201ENST00000261726 FKBPLQ9UIM3 349 aa14.04□□□□□ -0.16
CUX2-201ENST00000261726 M0R036 132 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PPEF2O14830 753 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 COL6A2P12110 1019 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 OR12D2P58182 307 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 IL17AQ16552 155 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 ZNF676Q8N7Q3 588 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 HMGXB4Q9UGU5 601 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 TM7SF2O76062 418 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 OAZ2O95190 189 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 RHOQP17081 205 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 RORCP51449 518 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 GNA12Q03113 381 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 FASTKD3Q14CZ7 662 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 COLEC12Q5KU26 742 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 CYP2U1Q7Z449 544 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 CLNKQ7Z7G1 428 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 FAM13CQ8NE31 585 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PPTC7Q8NI37 304 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SPEF1Q9Y4P9 236 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 ASLP04424 464 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 ACSL1P33121 698 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 HYAL2Q12891 473 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 BEND4Q6ZU67 534 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PNLDC1Q8NA58 520 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 MTERF1Q99551 399 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 IKZF4Q9H2S9 585 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 DPEP3Q9H4B8 488 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 ADAP2Q9NPF8 381 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 AASSQ9UDR5 926 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PLEKHA6Q9Y2H5 1048 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 EIF1AYO14602 144 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 KHNYNO15037 678 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 PCDHGA12O60330 932 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SCELO95171 688 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 EDNRAP25101 427 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 FAM174BQ3ZCQ3 159 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 CYP27C1Q4G0S4 372 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 PCDHB18PQ96TA0 734 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 DERAQ9Y315 318 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 WASHC1A8K0Z3 465 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 WASH3PC4AMC7 463 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 POP4O95707 220 aaKnown RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 GBX2P52951 348 aaPredicted RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 METTL21CQ5VZV1 264 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 WASH2PQ6VEQ5 465 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SPOCK2Q92563 424 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 CENPNQ96H22 339 aaPredicted RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 TTYH2Q9BSA4 534 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 LHX5Q9H2C1 402 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 SEC61A2Q9H9S3 476 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 POLR3BQ9NW08 1133 aaPredicted RBP14.03□□□□□ -0.16
CUX2-201ENST00000261726 NWD1Q149M9 1564 aa14.03□□□□□ -0.16
CUX2-201ENST00000261726 E7EQ34 232 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 E2F3O00716 465 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 AP2A1O95782 977 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 FLT3LGP49771 235 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 CDKN1CP49918 316 aaPredicted RBP14.02□□□□□ -0.16
CUX2-201ENST00000261726 RGMBQ6NW40 437 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 USP43Q70EL4 1123 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 C7orf61Q8IZ16 206 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 OR2L2Q8NH16 312 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 GPR89AB7ZAQ6 455 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 STATHP02808 62 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 CFIP05156 583 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 GPR89BP0CG08 455 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 CXCR1P25024 350 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 GPR68Q15743 365 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 VSTM1Q6UX27 236 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 SH3RF1Q7Z6J0 888 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 ZNF101Q8IZC7 436 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 OR5M3Q8NGP4 307 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 TBL1XR1Q9BZK7 514 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 ZNF700Q9H0M5 742 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 OR2AG1Q9H205 316 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 ARL5AQ9Y689 179 aa14.02□□□□□ -0.16
CUX2-201ENST00000261726 CYP3A7-CYP3A51PA0A087WV96 503 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 B4DGG1 531 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 VNN2O95498 520 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 CYP3A7P24462 503 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 CASRP41180 1078 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 MLLT3P42568 568 aaPredicted RBP14.02□□□□□ -0.17
CUX2-201ENST00000261726 NAPRTQ6XQN6 538 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 MPP5Q8N3R9 675 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 SLC22A8Q8TCC7 542 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 ALG5Q9Y673 324 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 SMIM28A0A1B0GU29 152 aa14.02□□□□□ -0.17
CUX2-201ENST00000261726 NUAK1O60285 661 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms