RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DNAJB9Q9UBS3 223 aa13.21□□□□□ -0.29
VHL-201ENST00000256474 BLOC1S6Q9UL45 172 aa13.21□□□□□ -0.29
VHL-201ENST00000256474 IFRD1O00458 451 aaPredicted RBP13.21□□□□□ -0.3
VHL-201ENST00000256474 STK16O75716 305 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 OPN1SWP03999 348 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 FUCA1P04066 466 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 HSMCR30P0CW71 290 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 TNFRSF1BP20333 461 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 IGFBP5P24593 272 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 TRAF3Q13114 568 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 FAM180BQ6P0A1 224 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 AHSA2Q719I0 299 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 RNF180Q86T96 592 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 ADHFE1Q8IWW8 467 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 MICU2Q8IYU8 434 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 BEND7Q8N7W2 519 aaPredicted RBP13.21□□□□□ -0.3
VHL-201ENST00000256474 TANKQ92844 425 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 BRINP2Q9C0B6 783 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 POPDC3Q9HBV1 291 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 C3orf18Q9UK00 162 aa13.21□□□□□ -0.3
VHL-201ENST00000256474 TAPBPO15533 448 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ABCB7O75027 752 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 FAM20BO75063 409 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 MSH3P20585 1137 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 DGKAP23743 735 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 CRHBPP24387 322 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 HTR1BP28222 390 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 EPHA2P29317 976 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 HOXC8P31273 242 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 SEPHS1P49903 392 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ARHGDIAP52565 204 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 NECAB2Q7Z6G3 386 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ZBTB2Q8N680 514 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 CHDHQ8NE62 594 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 TUBA8Q9NY65 449 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 PDP1Q9P0J1 537 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 IL17CQ9P0M4 197 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 PSME2Q9UL46 239 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 SLC22A14Q9Y267 594 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 GMPPBQ9Y5P6 360 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 GLYATL1P3A0A0U1RQE8 302 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 OR2AG2A6NM03 316 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 BCAS1O75363 584 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 PDYNP01213 254 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 HIST1H2AGP0C0S8 130 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 POU2F1P14859 743 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 RPS14P62263 151 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 DSC1Q08554 894 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 PTRH1Q86Y79 214 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 BPIFB1Q8TDL5 484 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 RPL3LQ92901 407 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 RERGLQ9H628 205 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 IL26Q9NPH9 171 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 ZSWIM8A7E2V4 1837 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 LOC100506127A0A0U1RQW1 187 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 LINC00854A0A1B0GVQ3 168 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 MANSC4A6NHS7 340 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 OR6C75A6NL08 312 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 EVPLLA8MZ36 301 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ADAMTS4O75173 837 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 IDH2P48735 452 aaKnown RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 NUDT6P53370 316 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 NCS1P62166 190 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 ABRQ12979 859 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 UBE2R2Q712K3 238 aaPredicted RBP13.2□□□□□ -0.3
VHL-201ENST00000256474 NDNFQ8TB73 568 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 STON2Q8WXE9 905 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 SH3BP4Q9P0V3 963 aa13.2□□□□□ -0.3
VHL-201ENST00000256474 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 M0R129 80 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 UPK1AO00322 258 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 KRT6AP02538 564 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 KRT6BP04259 564 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 CDH3P22223 829 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 DCKP27707 260 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 TTKP33981 857 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 DCTP40126 519 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 KRT6CP48668 564 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 CLK1P49759 484 aaKnown RBP13.19□□□□□ -0.3
VHL-201ENST00000256474 AQP6Q13520 282 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 IGFN1Q86VF2 1251 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 SYT12Q8IV01 421 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
VHL-201ENST00000256474 RBFAQ8N0V3 343 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 SPPL2AQ8TCT8 520 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms