RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 ISL1P61371 349 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 CTF1Q16619 201 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 GATAD2AQ86YP4 633 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 FAR1Q8WVX9 515 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 CHCHD6Q9BRQ6 235 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 PRDM5Q9NQX1 630 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 DLGAP4Q9Y2H0 992 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 TRIM64CA6NLI5 447 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 RGS14O43566 566 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 MFN2O95140 757 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 OGNP20774 298 aaKnown RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 TTPAP49638 278 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF177Q13360 481 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 COL9A2Q14055 689 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 DMC1Q14565 340 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 LAIR2Q6ISS4 152 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 RGMBQ6NW40 437 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 B3GNT8Q7Z7M8 397 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 LRRC49Q8IUZ0 686 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 SPPL2AQ8TCT8 520 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 LGALS12Q96DT0 336 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 TUBA1CQ9BQE3 449 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 CRLS1Q9UJA2 301 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 PCDHB5Q9Y5E4 795 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 EFCAB9A8MZ26 197 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 RFXANKO14593 260 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 SNPHO15079 494 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 RAD51BO15315 384 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 MTX2O75431 263 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 OTCP00480 354 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 CA5AP35218 305 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 GRSF1Q12849 480 aaKnown RBP eCLIP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 XKR7Q5GH72 579 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 NANOGNBQ7Z5D8 188 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 FAM83FQ8NEG4 500 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 NDEL1Q9GZM8 345 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 ELOVL6Q9H5J4 265 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 KRT84Q9NSB2 600 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 NLE1Q9NVX2 485 aaPredicted RBP16.5■□□□□ 0.23
SGPP1-201ENST00000247225 ARL15Q9NXU5 204 aa16.5■□□□□ 0.23
SGPP1-201ENST00000247225 ANKRD66B4E2M5 251 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 TSPAN12O95859 305 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 ADAM17P78536 824 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 CLCA4Q14CN2 919 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 LAIR1Q6GTX8 287 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 SERPINA9Q86WD7 417 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF548Q8NEK5 533 aaPredicted RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 MAL2Q969L2 176 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 DMRTB1Q96MA1 342 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 CRISPLD1Q9H336 500 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 FBXO44Q9H4M3 255 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 ELOVL2Q9NXB9 296 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 INTS6Q9UL03 887 aaKnown RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 PRSS21Q9Y6M0 314 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 HOXC13P31276 330 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 PCBP1Q15365 356 aaKnown RBP eCLIP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF362Q5T0B9 420 aaPredicted RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 C11orf74Q86VG3 221 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 FKBP10Q96AY3 582 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 NUSAP1Q9BXS6 441 aaKnown RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 YTHDF1Q9BYJ9 559 aaKnown RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 BRINP2Q9C0B6 783 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 TLR8Q9NR97 1041 aaKnown RBP16.49■□□□□ 0.23
SGPP1-201ENST00000247225 C14orf119Q9NWQ9 140 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 TPRKBQ9Y3C4 175 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 TESMINQ9Y4I5 508 aa16.49■□□□□ 0.23
SGPP1-201ENST00000247225 UGT2B11O75310 529 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 WISP3O95389 354 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF865P0CJ78 1059 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 AZGP1P25311 298 aaKnown RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 RHOAP61586 193 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 MVKQ03426 396 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 SLC14A1Q13336 389 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 BOP1Q14137 746 aaKnown RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 CCDC117Q8IWD4 279 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 ADGRG2Q8IZP9 1017 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 OR5K1Q8NHB7 308 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 PANX1Q96RD7 426 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 KCNS3Q9BQ31 491 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 DCSTAMPQ9H295 470 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 EHD1Q9H4M9 534 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 GPN2Q9H9Y4 310 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 SMIM30A4D0T7 59 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 PABPN1LA6NDY0 278 aaKnown RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 RGS10O43665 173 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 BCKDHAP12694 445 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 TRAF3Q13114 568 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 TAF1CQ15572 869 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 PARP15Q460N3 678 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 ZNF648Q5T619 568 aaPredicted RBP16.48■□□□□ 0.23
SGPP1-201ENST00000247225 AFMIDQ63HM1 303 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 FAM180BQ6P0A1 224 aa16.48■□□□□ 0.23
SGPP1-201ENST00000247225 CD300LGQ6UXG3 332 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms