RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 FNIP2Q9P278 1114 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 LGALS2P05162 132 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 NDST2P52849 883 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TLR1Q15399 786 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ANKDD1AQ495B1 522 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RNASE12Q5GAN4 147 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 DPY19L3Q6ZPD9 716 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CEP295NLQ96MC4 621 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 COL20A1Q9P218 1284 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 COQ4Q9Y3A0 265 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 XYLBO75191 536 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SPAM1P38567 509 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TMEM198Q66K66 360 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 DUS1LQ6P1R4 473 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 SCML4Q8N228 414 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ZBED6CLQ96FA7 236 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 ZNF350Q9GZX5 532 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 IFT52Q9Y366 437 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TIMM22Q9Y584 194 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 A0A0J9YVX5 310 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ZNF81P51508 661 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TSPAN5P62079 268 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RPL6Q02878 288 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 OGFRL1Q5TC84 451 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 VANGL1Q8TAA9 524 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 DMAC2Q9NW81 257 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ERAL1O75616 437 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 KAT7O95251 611 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 FOSL2P15408 326 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RXRBP28702 533 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CD97P48960 835 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CRISP3P54108 245 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ITPK1Q13572 414 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TRMT10BQ6PF06 316 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 CMTR2Q8IYT2 770 aaKnown RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 BRSK1Q8TDC3 778 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 C5orf51A6NDU8 294 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 LRRN3E7EW58 273 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CXCL11O14625 94 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SLC35G4P0C7Q5 338 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ABHD18Q0P651 414 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 RPA4Q13156 261 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 HDDC3Q8N4P3 179 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 PYURFQ96I23 114 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ART5Q96L15 291 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 LRRN3Q9H3W5 708 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TMEM63AO94886 807 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 AGR2O95994 175 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 ZNF182P17025 639 aaPredicted RBP8.07□□□□□ -1.12
APOB-201ENST00000233242 MTPNP58546 118 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 CAPSQ13938 189 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 LGI4Q8N135 537 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 MSANTD3Q96H12 275 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 SYNDIG1Q9H7V2 258 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 TVP23BQ9NYZ1 205 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 PCDHGB5Q9Y5G0 923 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 PCDHGB2Q9Y5G2 931 aa8.07□□□□□ -1.12
APOB-201ENST00000233242 KMOO15229 486 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 BUD23O43709 281 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 RAB36O95755 333 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CHRNA1P02708 482 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 GPR1P46091 355 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 HSDL1Q3SXM5 330 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PAN2Q504Q3 1202 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 COQ5Q5HYK3 327 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 TMEM80Q96HE8 168 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 ZSCAN5AQ9BUG6 496 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 MFSD1Q9H3U5 465 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SLC27A6Q9Y2P4 619 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SLC25A14O95258 325 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 C22orf31O95567 290 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SLC1A2P43004 574 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 RAP1GAP2Q684P5 730 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SYVN1Q86TM6 617 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PHTF2Q8N3S3 785 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 GPER1Q99527 375 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 NDC1Q9BTX1 674 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SNX10Q9Y5X0 201 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 ZSCAN5BA6NJL1 495 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CYP2B6P20813 491 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 FAM151BQ6UXP7 276 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 ANKFN1Q8N957 763 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CHIAQ9BZP6 476 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 TEX264Q9Y6I9 313 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CROCCQ5TZA2 2017 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 KCNQ2O43526 872 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 TYROBPO43914 113 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 OR2B3O76000 313 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 MPP2Q14168 576 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CBX2Q14781 532 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 ECM1Q16610 540 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PITRM1Q5JRX3 1037 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 C10orf62Q5T681 223 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 ARMC10Q8N2F6 343 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 DUSP26Q9BV47 211 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 XPNPEP2O43895 674 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 MEDAGQ5VYS4 303 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 ING5Q8WYH8 240 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PRMT6Q96LA8 375 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms