RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 HNRNPDLO14979 420 aaKnown RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 IFNA7P01567 189 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TNNC2P02585 160 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 CSF3P09919 207 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ZNF91Q05481 1191 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 GRM1Q13255 1194 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 IQCCQ4KMZ1 466 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 FAM160B1Q5W0V3 765 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PLET1Q6UQ28 207 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 KCNMB4Q86W47 210 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TEX47Q8TBZ9 253 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ISG20Q96AZ6 181 aaKnown RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 GPRASP2Q96D09 838 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 WDFY2Q96P53 400 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 RHOJQ9H4E5 214 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SLAMF8Q9P0V8 285 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 OGDHLQ9ULD0 1010 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 GINS2Q9Y248 185 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 IRS2Q9Y4H2 1338 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ABCD4O14678 606 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SEC22BO75396 215 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PFKLP17858 780 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 KCNA5P22460 613 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PHYKPLQ8IUZ5 450 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ZNF431Q8TF32 576 aaPredicted RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 HTR3CQ8WXA8 447 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 FUBP1Q96AE4 644 aaKnown RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 KATNAL1Q9BW62 490 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 KMT5AQ9NQR1 393 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PRKAG2Q9UGJ0 569 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 DTX4Q9Y2E6 619 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 KLK4Q9Y5K2 254 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 EEDO75530 441 aaKnown RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 ACSM4P0C7M7 580 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SRCP12931 536 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 MEOX2P50222 304 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 GRB7Q14451 532 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 FSCN1Q16658 493 aaKnown RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.75□□□□□ -0.371e-5■□□□□ 9.3
MSH2-201ENST00000233146 MPP7Q5T2T1 576 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TRNP1Q6NT89 227 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ARHGAP36Q6ZRI8 547 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 RNF130Q86XS8 419 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SLC41A1Q8IVJ1 513 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TIGD4Q8IY51 512 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 CLRN3Q8NCR9 226 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SYTL5Q8TDW5 730 aaPredicted RBP12.75□□□□□ -0.37
MSH2-201ENST00000233146 ASB12Q8WXK4 309 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SLC9A6Q92581 669 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PHF21AQ96BD5 680 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 RADILQ96JH8 1075 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 VAT1Q99536 393 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 ZNF670Q9BS34 389 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 BCL2L14Q9BZR8 327 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SLC19A3Q9BZV2 496 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 TMEM245Q9H330 911 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 CISHQ9NSE2 258 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SMPD4Q9NXE4 827 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 GIMAP2Q9UG22 337 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 UBQLN2Q9UHD9 624 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 COMMD10Q9Y6G5 202 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
MSH2-201ENST00000233146 PIPSLA2A3N6 862 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 FABP7O15540 132 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 VPS26AO75436 327 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 WBP4O75554 376 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 DARSP14868 501 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 DMP1Q13316 513 aaPredicted RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 ZNF460Q14592 562 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GRIK4Q16099 956 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 FAM182BQ5T319 152 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 ENPP6Q6UWR7 440 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 MRPL10Q7Z7H8 261 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 TUBGCP3Q96CW5 907 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 NTPCRQ9BSD7 190 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 CYP4F12Q9HCS2 524 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 RGS17Q9UGC6 210 aaPredicted RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 UTS2RQ9UKP6 389 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 PCDHGA9Q9Y5G4 932 aaKnown RBP12.74□□□□□ -0.37
MSH2-201ENST00000233146 ST8SIA5O15466 376 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 PROM1O43490 865 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GGT1P19440 569 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GPD1P21695 349 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 CYP2F1P24903 491 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 CHRNA5P30532 468 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 SSTP61278 116 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 Q3ZCU0 254 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 JADE1Q6IE81 842 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 SLC26A9Q7LBE3 791 aa12.74□□□□□ -0.37
MSH2-201ENST00000233146 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms