RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KIAA1614Q5VZ46 1190 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 UNC5DQ6UXZ4 953 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 GALNT7Q86SF2 657 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 TRIM73Q86UV7 250 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 LRRC56Q8IYG6 542 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 D2HGDHQ8N465 521 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 ZBTB2Q8N680 514 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 CFAP61Q8NHU2 1237 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 KCNJ9Q92806 393 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 TRAPPC9Q96Q05 1148 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 PANX3Q96QZ0 392 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 OLFM1Q99784 485 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 NAT9Q9BTE0 207 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 DDA1Q9BW61 102 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 SYNPO2LQ9H987 977 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 SLC39A1Q9NY26 324 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 ACTR10Q9NZ32 417 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 KLHL42Q9P2K6 505 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 PILRAQ9UKJ1 303 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 RALYQ9UKM9 306 aaKnown RBP13.29□□□□□ -0.28
VEGFA-201ENST00000230480 BTRCQ9Y297 605 aa13.29□□□□□ -0.28
VEGFA-201ENST00000230480 TLCD2A6NGC4 264 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 GFYI3L273 518 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 TERTO14746 1132 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PSIP1O75475 530 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 DLGAP3O95886 979 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 CHRM5P08912 532 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 EBLN1P0CF75 366 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ERGP11308 486 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 FGF5P12034 268 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 UGT2B7P16662 529 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ATP5DP30049 168 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PLTPP55058 493 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PCBP4P57723 403 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 FASTKQ14296 549 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PLCL1Q15111 1095 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 KLHL38Q2WGJ6 581 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PRAMEF17Q5VTA0 474 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ZNF771Q7L3S4 317 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 OTOAQ7RTW8 1153 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 OOSP2Q86WS3 158 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 C2orf73Q8N5S3 287 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 OTUD6BQ8N6M0 293 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 SLC38A9Q8NBW4 561 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ZNF248Q8NDW4 579 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ASB11Q8WXH4 323 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 NKD1Q969G9 470 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 ZDHHC12Q96GR4 267 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 FAM167BQ9BTA0 163 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 KLHL25Q9H0H3 589 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 TRIT1Q9H3H1 467 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PRORYQ9H606 182 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 SAYSD1Q9NPB0 183 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 TDRKHQ9Y2W6 561 aaKnown RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 TMEM184BQ9Y519 407 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-201ENST00000230480 PIEZO2Q9H5I5 2752 aa13.28□□□□□ -0.28
VEGFA-201ENST00000230480 H3BMM5 538 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 NRP2O60462 931 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 CHRM3P20309 590 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 CD9P21926 228 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 SYTL3Q4VX76 610 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 PAQR3Q6TCH7 311 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 PCSK4Q6UW60 755 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 KIAA0408Q6ZU52 694 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 PIWIL4Q7Z3Z4 852 aaKnown RBP13.27□□□□□ -0.29
VEGFA-201ENST00000230480 ZC3HC1Q86WB0 502 aaKnown RBP13.27□□□□□ -0.29
VEGFA-201ENST00000230480 FAM129CQ86XR2 697 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 CPNE9Q8IYJ1 553 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 ZBED8Q8IZ13 594 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 BBOF1Q8ND07 529 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 GSDMBQ8TAX9 411 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 CALML6Q8TD86 181 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 UBXN4Q92575 508 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 INPP5DQ92835 1189 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 ZNF501Q96CX3 271 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-201ENST00000230480 OR6C1Q96RD1 312 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 CD180Q99467 661 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 LRRC4CQ9HCJ2 640 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 C1GALT1Q9NS00 363 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 TSR3Q9UJK0 312 aaKnown RBP13.27□□□□□ -0.29
VEGFA-201ENST00000230480 ADAMTS6Q9UKP5 1117 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 KLHL20Q9Y2M5 609 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 MED13Q9UHV7 2174 aa13.27□□□□□ -0.29
VEGFA-201ENST00000230480 ATMQ13315 3056 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 TCRBV9S1A1TA0A576 114 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 FAM159BA6NKW6 160 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 KPNA5O15131 536 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 EIF3HO15372 352 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■□□□ 12.6
VEGFA-201ENST00000230480 TUBB4AP04350 444 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 FDXRP22570 491 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 F8A1P23610 371 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 GCGRP47871 477 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 RAB28P51157 221 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
VEGFA-201ENST00000230480 MGAT5Q09328 741 aa13.26□□□□□ -0.29
VEGFA-201ENST00000230480 COL9A2Q14055 689 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-201ENST00000230480 GPR19Q15760 415 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms