RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
PRPF19-201ENST00000227524 GPR62Q9BZJ7 368 aa17.11■□□□□ 0.33
PRPF19-201ENST00000227524 NSUN3Q9H649 340 aaKnown RBP17.11■□□□□ 0.33
PRPF19-201ENST00000227524 ELOVL2Q9NXB9 296 aa17.11■□□□□ 0.33
PRPF19-201ENST00000227524 FBXO10Q9UK96 956 aa17.11■□□□□ 0.33
PRPF19-201ENST00000227524 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
PRPF19-201ENST00000227524 AP3M1Q9Y2T2 418 aa17.11■□□□□ 0.33
PRPF19-201ENST00000227524 TRBV5-3A0A0A0MS03 114 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 ANKRD66B4E2M5 251 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 H7C0S8 307 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 FFAR3O14843 346 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 SLC22A1O15245 554 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 RAD51BO15315 384 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 GPR42O15529 346 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 TAPBPO15533 448 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 SERPINA1P01009 418 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 VAC14Q08AM6 782 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 SMU1Q2TAY7 513 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 ANKRD33Q7Z3H0 272 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 PLPP6Q8IY26 295 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 CHPFQ8IZ52 775 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 KRTCAP2Q8N6L1 136 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 NDNFQ8TB73 568 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 FAM193BQ96PV7 902 aaPredicted RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 CLMPQ9H6B4 373 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 KAT8Q9H7Z6 458 aaKnown RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 ZFP14Q9HCL3 533 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 GIN1Q9NXP7 522 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 INTS6Q9UL03 887 aaKnown RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 ZFP37Q9Y6Q3 630 aaPredicted RBP17.1■□□□□ 0.33
PRPF19-201ENST00000227524 U3KQV3 271 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
PRPF19-201ENST00000227524 SLC28A1O00337 649 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ANGPTL1O95841 491 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 GLUD1P00367 558 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 CXCL10P02778 98 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 F11P03951 625 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 EIF2B2P49770 351 aaKnown RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 CCL23P55773 120 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 HMGCS1Q01581 520 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ADPRMQ3LIE5 342 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ATG9BQ674R7 924 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 CALHM3Q86XJ0 350 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 STK40Q8N2I9 435 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 MFSD4AQ8N468 514 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 MINDY2Q8NBR6 621 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 NETO1Q8TDF5 533 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 SLC6A13Q9NSD5 602 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 VNN3Q9NY84 501 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ERVK-18Q9QC07 812 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 H3BNC9 293 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 M0QX08 132 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 MITFO75030 526 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 GUCA1CO95843 209 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 SLC11A1P49279 550 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 IFITM3Q01628 133 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 MRPL58Q14197 206 aaKnown RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 DET1Q7L5Y6 550 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 RORBQ92753 470 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 YIPF6Q96EC8 236 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 OR52E6Q96RD3 313 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 PSD2Q9BQI7 771 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 CPPED1Q9BRF8 314 aaPredicted RBP17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ADGRE3Q9BY15 652 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 ATP13A3Q9H7F0 1226 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 NECTIN3Q9NQS3 549 aa17.09■□□□□ 0.33
PRPF19-201ENST00000227524 M0R3G1 203 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 PRMT5O14744 637 aaPredicted RBP17.08■□□□□ 0.33
PRPF19-201ENST00000227524 SYN3O14994 580 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 ACSL4O60488 711 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 TLR5O60602 858 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 FTH1P02794 183 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 IL1RNP18510 177 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 FSHRP23945 695 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 IGFBP5P24593 272 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 ACVR2AP27037 513 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 MAP2K4P45985 399 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 GZMMP51124 257 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 CDH4P55283 916 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 CTXN3Q4LDR2 81 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 SUSD1Q6UWL2 747 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 SLC39A5Q6ZMH5 540 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 B3GNT8Q7Z7M8 397 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 SNX29P2Q8IUI4 249 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 C10orf111Q8N326 155 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 VWCEQ96DN2 955 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 CCDC97Q96F63 343 aaPredicted RBP17.08■□□□□ 0.33
PRPF19-201ENST00000227524 REXO5Q96IC2 774 aaKnown RBP17.08■□□□□ 0.33
PRPF19-201ENST00000227524 ITCHQ96J02 903 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 FBXO8Q9NRD0 319 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 C1orf109Q9NX04 203 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 ASIC5Q9NY37 505 aa17.08■□□□□ 0.33
PRPF19-201ENST00000227524 DNMT3BQ9UBC3 853 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms