RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PDCD5O14737 125 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 INPPL1O15357 1258 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 OR1I1O60431 355 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PSMA1P25786 263 aaKnown RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 NRIP1P48552 1158 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 DAOAP59103 153 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 NFKB2Q00653 900 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 TARDBPQ13148 414 aaKnown RBP eCLIP13□□□□□ -0.33
COL1A1-201ENST00000225964 TMPRSS9Q7Z410 1059 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 GPALPP1Q8IXQ4 340 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PROKR2Q8NFJ6 384 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CLEC4CQ8WTT0 213 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 BRD7Q9NPI1 651 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 SH3D21A4FU49 640 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 A8MUI8 341 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PITPNM1O00562 1244 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 ADAMDEC1O15204 470 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PCDH7O60245 1069 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CDKN2BP42772 138 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 IFI44LQ53G44 452 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 MSANTD1Q6ZTZ1 278 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 AKAP14Q86UN6 197 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 NXPE1Q8N323 547 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 TTLQ8NG68 377 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 ESAMQ96AP7 390 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 TVP23BQ9NYZ1 205 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 HMGXB4Q9UGU5 601 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PPLO60437 1756 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CHRNA1P02708 482 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 PRH1P02810 166 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 MAP3K8P41279 467 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CYP27C1Q4G0S4 372 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 AAGABQ6PD74 315 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 DNAJB7Q7Z6W7 309 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 SAMD14Q8IZD0 417 aaPredicted RBP13□□□□□ -0.33
COL1A1-201ENST00000225964 MPP5Q8N3R9 675 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 CRTAC1Q9NQ79 661 aa13□□□□□ -0.33
COL1A1-201ENST00000225964 TGFB1P01137 390 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 KLK3P07288 261 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 GHRHRQ02643 423 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 E2F2Q14209 437 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 HPS1Q92902 700 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 PCDHGA11Q9Y5H2 935 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ARVCFO00192 962 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 MUSKO15146 869 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CSN2P05814 226 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ALPIP09923 528 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 NUDT17P0C025 328 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 HSD17B2P37059 387 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 EIF1AXP47813 144 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SEPHS1P49903 392 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SCARB2Q14108 478 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CCDC80Q76M96 950 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 UFD1Q92890 307 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 METTL7AQ9H8H3 244 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SEC61A2Q9H9S3 476 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CDH22Q9UJ99 828 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 TLR6Q9Y2C9 796 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CXCR6O00574 342 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 AKAP8O43823 692 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 LRCH4O75427 683 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SNX4O95219 450 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CCNOP22674 350 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ARF3P61204 181 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ARF1P84077 181 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CELF5Q8N6W0 485 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 COPS4Q9BT78 406 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SUV39H2Q9H5I1 410 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SMURF1Q9HCE7 757 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 S100A14Q9HCY8 104 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 R3HDM2Q9Y2K5 976 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 INSL6Q9Y581 213 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CA12O43570 354 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 INMTO95050 263 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 NDUFS1P28331 727 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 LIMK2P53671 638 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 USP30Q70CQ3 517 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CEP97Q8IW35 865 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ZNF611Q8N823 705 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 NCSTNQ92542 709 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CLPTM1LQ96KA5 538 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ATXN10Q9UBB4 475 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ANGPTL1O95841 491 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 ESR1P03372 595 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 PRPS2P11908 318 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 SLBPQ14493 270 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL1A1-201ENST00000225964 PDSS1Q5T2R2 415 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 PQLC1Q8N2U9 271 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 C1orf109Q9NX04 203 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 NPIPA5E9PKD4 350 aa12.99□□□□□ -0.33
COL1A1-201ENST00000225964 TSPAN9O75954 239 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms