RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 TBX10O75333 385 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 MTX2O75431 263 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ECDO95905 644 aaPredicted RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 TFPIP10646 304 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 PRPS1L1P21108 318 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 AQP4P55087 323 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 AP1S2P56377 157 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 STXBP1P61764 594 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 PCDH1Q08174 1060 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ADGRE1Q14246 886 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 LPIN1Q14693 890 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 IFI44LQ53G44 452 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 RBM20Q5T481 1227 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 TMPRSS11AQ6ZMR5 421 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 TIFABQ6ZNK6 161 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CAND1Q86VP6 1230 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 HID1Q8IV36 788 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 C7orf61Q8IZ16 206 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ZNF461Q8TAF7 563 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ZBED6CLQ96FA7 236 aaPredicted RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 ZNF354BQ96LW1 612 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CALML5Q9NZT1 146 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 LOXHD1Q8IVV2 1947 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 DPPA5A6NC42 116 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 AQP12BA6NM10 295 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 HCN1O60741 890 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 KRT33AO76009 404 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 DLDP09622 509 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 RAP2AP10114 183 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CKMT2P17540 419 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CD247P20963 164 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 PEG10Q86TG7 708 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 AQP12AQ8IXF9 295 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 CADM2Q8N3J6 435 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 DNAJB8Q8NHS0 232 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ZNF483Q8TF39 744 aaPredicted RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 WDR12Q9GZL7 423 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 MYH9P35579 1960 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 LOC110117498-PIK3R3F6TDL0 507 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 POU2F1P14859 743 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 SLC11A1P49279 550 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 RPTNQ6XPR3 784 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 TMC8Q8IU68 726 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 GJD3Q8N144 294 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 SVOPLQ8N434 492 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 RNASE11Q8TAA1 199 aaKnown RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 ZCCHC10Q8TBK6 192 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 C5orf34Q96MH7 638 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 TMEM175Q9BSA9 504 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 TMEM138Q9NPI0 162 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 NKX1-2Q9UD57 310 aaPredicted RBP11.29□□□□□ -0.6
NOD1-201ENST00000222823 INSL6Q9Y581 213 aa11.29□□□□□ -0.6
NOD1-201ENST00000222823 UBE2QL1A1L167 161 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 CNTN5O94779 1100 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 SLC7A1P30825 629 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 CCNFP41002 786 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 NFKB2Q00653 900 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 TRIM32Q13049 653 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 HERC3Q15034 1050 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 POMZP3Q6PJE2 187 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 Q6ZVU0 165 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 SAMD14Q8IZD0 417 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 HDDC3Q8N4P3 179 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 TTC29Q8NA56 475 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 PIWIL1Q96J94 861 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 RIOK2Q9BVS4 552 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 RPRD1BQ9NQG5 326 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZNF282Q9UDV7 671 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 IKZF2Q9UKS7 526 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 PDE10AQ9Y233 779 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 TMEM233B4DJY2 109 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 TAF4O00268 1085 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 PCDH7O60245 1069 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 NME6O75414 186 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 EDN1P05305 212 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 HNMTP50135 292 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZNF155Q12901 538 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 PDGFRLQ15198 375 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 MS4A13Q5J8X5 152 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 BRAT1Q6PJG6 821 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 OAFQ86UD1 273 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 GTPBP3Q969Y2 492 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 ART5Q96L15 291 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 SRMSQ9H3Y6 488 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 EXO5Q9H790 373 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZDHHC4Q9NPG8 344 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 NECTIN3Q9NQS3 549 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 DIABLOQ9NR28 239 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZCCHC3Q9NUD5 404 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 SIRPGQ9P1W8 387 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms