RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 SPAM1P38567 509 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 MRPL19P49406 292 aaKnown RBP10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 STX5Q13190 355 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 NFATC2Q13469 925 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 CCNIQ14094 377 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 PLPP4Q5VZY2 271 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 ZDHHC20Q5W0Z9 365 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 ISLR2Q6UXK2 745 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 TPRG1Q6ZUI0 275 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 OR6K2Q8NGY2 324 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 SPPL3Q8TCT6 385 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 EEF1AKMT1Q8WVE0 214 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 HERVK_113Q902F9 699 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 OTUB2Q96DC9 234 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 MCCC1Q96RQ3 725 aaPredicted RBP10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 S100A14Q9HCY8 104 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 TLR9Q9NR96 1032 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 HCFC1R1Q9NWW0 138 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 PLK2Q9NYY3 685 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 PCTPQ9UKL6 214 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 SARDHQ9UL12 918 aa10.4□□□□□ -0.75
APOBEC3D-201ENST00000216099 KIAA1549LQ6ZVL6 1849 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 GLYATL1P3A0A0U1RQE8 302 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 WASH3PC4AMC7 463 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PSMD12O00232 456 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 LSM1O15116 133 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 NVLO15381 856 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 LILRA1O75019 489 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 GPC4O75487 556 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 POP4O95707 220 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PORP16435 677 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CHRM3P20309 590 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ACRV1P26436 265 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PSMD8P48556 350 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 FASTKQ14296 549 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TEAD2Q15562 447 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ZNF77Q15935 545 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TSTQ16762 297 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CARD16Q5EG05 197 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CLEC6AQ6EIG7 209 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 FAM151BQ6UXP7 276 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 HACD2Q6Y1H2 254 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 USP45Q70EL2 814 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ADAMTSL2Q86TH1 951 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CPNE9Q8IYJ1 553 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 HMGCLL1Q8TB92 370 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TWIST2Q8WVJ9 160 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 FAM136AQ96C01 138 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 SCRN2Q96FV2 425 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 MARK4Q96L34 752 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 HTATIP2Q9BUP3 242 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 SLC2A11Q9BYW1 496 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CNTD2Q9H8S5 307 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 IL26Q9NPH9 171 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PFDN4Q9NQP4 134 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TDP1Q9NUW8 608 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CCL26Q9Y258 94 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 FIS1Q9Y3D6 152 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TIMM22Q9Y584 194 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 DNAJC15Q9Y5T4 150 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 DENND4AQ7Z401 1863 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 C5orf67F2Z3F1 127 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 XYLBO75191 536 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 BTF3P20290 206 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 C5AR1P21730 350 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CTSOP43234 321 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CDH13P55290 713 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CNN3Q15417 329 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 MUM1Q2TAK8 710 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PIGGQ5H8A4 983 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PRSS36Q5K4E3 855 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 PTRHD1Q6GMV3 140 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ASTLQ6HA08 431 aaPredicted RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ZSWIM9Q86XI8 627 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TMEM25Q86YD3 366 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 NRG4Q8WWG1 115 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 IRF7Q92985 503 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 TM9SF2Q99805 663 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CCT7Q99832 543 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 SLC25A23Q9BV35 468 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 ASB8Q9H765 288 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 WDR41Q9HAD4 459 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 MRPL40Q9NQ50 206 aaKnown RBP10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 BCAP29Q9UHQ4 241 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 CROTQ9UKG9 612 aa10.39□□□□□ -0.75
APOBEC3D-201ENST00000216099 LRRC14BA6NHZ5 514 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 PDE5AO76074 875 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 UBXN7O94888 489 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 HTR3BO95264 441 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 TNFRSF6BO95407 300 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 CLDN7O95471 211 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 RHOP08100 348 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 TSPAN8P19075 237 aa10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 PBLDP30039 288 aaPredicted RBP10.38□□□□□ -0.75
APOBEC3D-201ENST00000216099 RGS4P49798 205 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms