RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 HS3ST2Q9Y278 367 aa16.92■□□□□ 0.3
CLDN11-201ENST00000064724 INVSQ9Y283 1065 aa16.92■□□□□ 0.3
CLDN11-201ENST00000064724 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
CLDN11-201ENST00000064724 MAGED1Q9Y5V3 778 aaPredicted RBP16.92■□□□□ 0.3
CLDN11-201ENST00000064724 KIAA1671Q9BY89 1806 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 KCNE1BA0A087WTH5 132 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 TRIM64BA6NI03 449 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 G3V2T6 193 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 NUAK1O60285 661 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CPNE6O95741 557 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 PDYNP01213 254 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CKMP06732 381 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 HOXB6P17509 224 aaKnown RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 IL1RNP18510 177 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CYP4F8P98187 520 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 RAB39AQ14964 217 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 ZDHHC20Q5W0Z9 365 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 KCTD8Q6ZWB6 473 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 FAM9CQ8IZT9 166 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 SVOPLQ8N434 492 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 TTC16Q8NEE8 873 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 PJA1Q8NG27 643 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 FBXO30Q8TB52 745 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 GFM2Q969S9 779 aaKnown RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 OSBPL10Q9BXB5 764 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 MAGIXQ9H6Y5 334 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 PARVBQ9HBI1 364 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 SERHLQ9NQF3 203 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 USE1Q9NZ43 259 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 PCDHB14Q9Y5E9 798 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 A0A096LPI6 279 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 KLHL33A6NCF5 533 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 FAM220BPB1ANY3 271 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 TEX28O15482 410 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 C8GP07360 202 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 PRPS2P11908 318 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 HOXB9P17482 250 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 LHCGRP22888 699 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CTSOP43234 321 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 RPS14P62263 151 aaKnown RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 EPS8Q12929 822 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 MYBPC3Q14896 1274 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 ZIK1Q3SY52 487 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 ZNF773Q6PK81 442 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 ASB11Q8WXH4 323 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 VWCEQ96DN2 955 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 SLC47A1Q96FL8 570 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CPPED1Q9BRF8 314 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 CPEB1Q9BZB8 566 aaKnown RBP16.91■□□□□ 0.3
CLDN11-201ENST00000064724 SLC6A13Q9NSD5 602 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 DLGAP4Q9Y2H0 992 aa16.91■□□□□ 0.3
CLDN11-201ENST00000064724 MICAL3Q7RTP6 2002 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 CST1P01037 141 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 OR56A5P0C7T3 313 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 JUNBP17275 347 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 SHMT2P34897 504 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 SLC6A12P48065 614 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 PPP2R2BQ00005 443 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 SEMG2Q02383 582 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 GRSF1Q12849 480 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 BOP1Q14137 746 aaKnown RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 GTDC1Q4AE62 458 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 LRRC23Q53EV4 343 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 TTC23Q5W5X9 447 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 CNKSR3Q6P9H4 555 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 THAP5Q7Z6K1 395 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 L3MBTL4Q8NA19 623 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 EZH1Q92800 747 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 TESCQ96BS2 214 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 MTFMTQ96DP5 389 aaKnown RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 HHIPQ96QV1 700 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 RC3H2Q9HBD1 1191 aaKnown RBP16.9■□□□□ 0.3
CLDN11-201ENST00000064724 SNX6Q9UNH7 406 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 CROCCQ5TZA2 2017 aa16.9■□□□□ 0.3
CLDN11-201ENST00000064724 SERTM1A2A2V5 107 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 PRKD3O94806 890 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 ACPPP15309 386 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 PTPN6P29350 595 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 STK19P49842 368 aaPredicted RBP16.89■□□□□ 0.3
CLDN11-201ENST00000064724 HNMTP50135 292 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 HNRNPFP52597 415 aaKnown RBP16.89■□□□□ 0.3
CLDN11-201ENST00000064724 PON2Q15165 354 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 DNAJC14Q6Y2X3 702 aaPredicted RBP16.89■□□□□ 0.3
CLDN11-201ENST00000064724 RFLNAQ6ZTI6 216 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 CLHC1Q8NHS4 586 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 SELENOMQ8WWX9 145 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 FAM162AQ96A26 154 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 SDCCAG3Q96C92 435 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 TBCDQ9BTW9 1192 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 TOR3AQ9H497 397 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 TMPRSS11EQ9UL52 423 aa16.89■□□□□ 0.3
CLDN11-201ENST00000064724 HEMK1Q9Y5R4 338 aaPredicted RBP16.89■□□□□ 0.3
CLDN11-201ENST00000064724 GFYI3L273 518 aa16.89■□□□□ 0.29
CLDN11-201ENST00000064724 LILRB3O75022 631 aa16.89■□□□□ 0.29
CLDN11-201ENST00000064724 CREG1O75629 220 aa16.89■□□□□ 0.29
CLDN11-201ENST00000064724 MPC1LP0DKB6 136 aa16.89■□□□□ 0.29
CLDN11-201ENST00000064724 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms