RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RPL3LQ92901 407 aaKnown RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PPP3R2Q96LZ3 170 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 CCDC115Q96NT0 180 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 DACH2Q96NX9 599 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ADAM2Q99965 735 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SCUBE2Q9NQ36 999 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC6A13Q9NSD5 602 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 NUDT4Q9NZJ9 180 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TMEFF2Q9UIK5 374 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SATB2Q9UPW6 733 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 PCDHB14Q9Y5E9 798 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC22A1O15245 554 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 KCNQ1P51787 676 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 TAF10Q12962 218 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 SMN1Q16637 294 aaKnown RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 GDF6Q6KF10 455 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 CES5AQ6NT32 575 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 B3GNT8Q7Z7M8 397 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 C10orf111Q8N326 155 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 Q8N9G6 341 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ZNF540Q8NDQ6 660 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ASPSCR1Q9BZE9 553 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 VNN3Q9NY84 501 aa10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 UBA2Q9UBT2 640 aaPredicted RBP10.3□□□□□ -0.76
CX3CL1-201ENST00000006053 DRGXA6NNA5 263 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 IFRD1O00458 451 aaPredicted RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 FFAR2O15552 330 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 MYO1DO94832 1006 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 OTCP00480 354 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 MT-ND2P03891 347 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 CCDC159P0C7I6 412 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TACR2P21452 398 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 THPOP40225 353 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TPTEP56180 551 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 KIAA0040Q15053 153 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TAF1CQ15572 869 aaPredicted RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 NDUFA5Q16718 116 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 LDLRAD1Q5T700 205 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 NADSYN1Q6IA69 706 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 PLD3Q8IV08 490 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 HTRA1Q92743 480 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 RNF38Q9H0F5 515 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 MAGEE1Q9HCI5 957 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 RASSF1Q9NS23 344 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 DCAF13Q9NV06 445 aaKnown RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 SCN3BQ9NY72 215 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 DNMT3BQ9UBC3 853 aaKnown RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 RIMKLBQ9ULI2 386 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 VPS9D1Q9Y2B5 631 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 DOCK4Q8N1I0 1966 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 DOCK3Q8IZD9 2030 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TTC34A8MYJ7 566 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 F5H5T6 163 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 INSIG1O15503 277 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 RGS14O43566 566 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TLR5O60602 858 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 B3GALT4O96024 378 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 ALOX5P09917 674 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TGM1P22735 817 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 SLC13A2Q13183 592 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 GNASQ5JWF2 1037 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 CYP4Z1Q86W10 505 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 HIPK1Q86Z02 1210 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 ZDHHC21Q8IVQ6 265 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 MFSD4AQ8N468 514 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 PIK3C3Q8NEB9 887 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 OR6Q1Q8NGQ2 317 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 VMP1Q96GC9 406 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 ABCG8Q9H221 673 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TRIT1Q9H3H1 467 aaKnown RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TPRKBQ9Y3C4 175 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 TNPO3Q9Y5L0 923 aaKnown RBP10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 RAI2Q9Y5P3 530 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 GMPPBQ9Y5P6 360 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 PMF1-BGLAPU3KQ54 211 aa10.29□□□□□ -0.76
CX3CL1-201ENST00000006053 CBX4O00257 560 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 FAM20BO75063 409 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PRLP01236 227 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 UBL4AP11441 157 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MAGP20916 626 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 HOXD9P28356 352 aaPredicted RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 RYKP34925 604 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ST13P50502 369 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 TRAF3Q13114 568 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CLCA4Q14CN2 919 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 RUNDC3AQ59EK9 446 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 CATSPEREQ5SY80 951 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PTRHD1Q6GMV3 140 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 LAIR1Q6GTX8 287 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 PLEKHG7Q6ZR37 379 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 MRPL10Q7Z7H8 261 aaKnown RBP10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 GALNT10Q86SR1 603 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 SPERTQ8NA61 448 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 KCNJ9Q92806 393 aa10.28□□□□□ -0.76
CX3CL1-201ENST00000006053 ULK4Q96C45 1275 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms