RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Hmgn3Q9DCB1 99 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc28a3Q9ERH8 703 aa13.16□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Cacna1dQ99246 2179 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr625-ps1A0A140T8L4 321 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ssxb6A2BI74 170 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kbtbd6E9PYD7 486 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zfp788E9Q980 884 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zfp846G3X996 541 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kbtbd7G5E8C2 690 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 LatO54957 242 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Aff2O55112 1272 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 PfklP12382 780 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Kcnj2P35561 428 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Lrfn1Q2WF71 766 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Flot2Q60634 428 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc6a3Q61327 619 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 CilpQ66K08 1184 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Btnl1Q7TST0 509 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Zcchc4Q8BKW4 512 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Trmt2bQ8BQJ6 493 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Q8C4P0 716 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr1311Q8VET0 312 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr617Q8VGA1 318 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Capn8Q91VA3 703 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Hdac11Q91WA3 347 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc22a7Q91WU2 540 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Det1Q9D0A0 550 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Q9D3J9 298 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pin1Q9QUR7 165 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Dnajb1Q9QYJ3 340 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Baz2aQ91YE5 1889 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Acbd4E9Q289 327 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Fbrsl1E9Q9T0 1031 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Vmn2r112L7N221 857 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Col6a2Q02788 1034 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 CenplQ3U3S3 329 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pacs2Q3V3Q7 862 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mocs1Q5RKZ7 636 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Mef2aQ60929 498 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Fam167aQ6P1G6 215 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Amigo2Q80ZD9 519 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Ppm1nQ8BGL1 404 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Thop1Q8C1A5 687 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Olfr606Q8VGZ8 319 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Pwp1Q99LL5 501 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Shmt2Q9CZN7 504 aaKnown RBP13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Acer3Q9D099 267 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Slc25a14Q9Z2B2 325 aa13.15□□□□□ -0.3
Rnf4-204ENSMUST00000182047 Gm7792A0A0J9YU01 481 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm3752A6NAT4 150 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm13271B1AYH9 182 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm3183D3YUJ6 481 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm3139J3QK78 481 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm3106J3QPH3 481 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Krt1P04104 637 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Serpina3kP07759 418 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gp6P0C191 313 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 GhrP16882 650 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 MaxP28574 160 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Foxk1P42128 719 aaKnown RBP13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Pfdn6Q03958 127 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 PomkQ3TUA9 349 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Kcna5Q61762 602 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Lpcat4Q6NVG1 524 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Krba1Q6NXZ1 1043 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Kif18bQ6PFD6 834 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Stk32cQ8QZV4 488 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 AmotQ8VHG2 1126 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Dio3Q91ZI8 304 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 MpstQ99J99 297 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rsph14Q9D3W1 341 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mgat4dQ9D4R2 373 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Cldn7Q9Z261 211 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 SpaarA0A1B0GSZ0 75 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Glipr1l3A0A1W2P7V2 236 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Psmb9P28076 219 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ccr7P47774 378 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 CdonQ32MD9 1250 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Pdap1Q3UHX2 181 aaKnown RBP13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm5800Q497L3 186 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Lrrc8dQ8BGR2 859 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Pi4k2bQ8CBQ5 469 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ints10Q8K2A7 710 aaKnown RBP13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Art3Q8R2G4 371 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Akr1c13Q8VC28 323 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Nxnl1Q8VC33 217 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mlc1Q8VHK5 382 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Lsm7Q9CQQ8 103 aaKnown RBP13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Snrnp48Q9D361 337 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 2010109A12RikQ9D875 119 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 TcimQ9D915 106 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 IL36RNQ9QYY1 156 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Ppm1dQ9QZ67 598 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Keap1Q9Z2X8 624 aaKnown RBP13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Znf318Q99PP2 2237 aa13.14□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Olfr1200A2ATJ4 336 aa13.13□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Gm6685D3YYP3 228 aa13.13□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Rnf169E9Q7F2 694 aa13.13□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Mknk1O08605 427 aa13.13□□□□□ -0.31
Rnf4-204ENSMUST00000182047 Neurod4O09105 330 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.4 ms