RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Capn3Q64691 821 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tas2r38Q7TQA6 331 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 AftphQ80WT5 931 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ap5m1Q8BJ63 490 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ccdc186Q8C9S4 917 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cdc16Q8R349 620 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ptbp2Q91Z31 531 aaKnown RBP12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Gtpbp3Q923K4 492 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cyp2j9Q924D1 502 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Asf1aQ9CQE6 204 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tubb3Q9ERD7 450 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 ProdhQ9WU79 599 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Epb41l1Q9Z2H5 879 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Rnf39A2RT81 352 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Mtx3D3YTP3 312 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 FpgtG5E8F4 590 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Gm29394H3BIW7 199 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Snx3O70492 162 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 H2-Q8P14430 326 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Gpc4P51655 557 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Pip5k1bP70181 539 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tbx4P70325 552 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Slc45a4Q0P5V9 785 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Perm1Q149B8 807 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cdkn2cQ60772 168 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Znf513Q6PD29 541 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Stk38lQ7TSE6 464 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Q8BWQ6 963 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Wdr47Q8CGF6 920 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Akr1c20Q8VC77 323 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cyp2u1Q9CX98 530 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Acer3Q9D099 267 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Mrpl17Q9D8P4 176 aa12.73□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cep295Q8BQ48 2412 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Pcsk5Q04592 1877 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Gm21731A0A286YDE9 180 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Gm1110F6Y113 635 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Zfp809G3X9G7 402 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Vmn1r169L7N275 304 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ebf2O08792 575 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 H2-Q7P14429 334 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 H2-Q9P14431 200 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 PctpP53808 214 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 OmpQ64288 163 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cpsf6Q6NVF9 551 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Olfr594Q7TRR4 311 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ccdc50Q810U5 305 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cep68Q8C0D9 733 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 HnmtQ91VF2 295 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cdkal1Q91WE6 578 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Depdc7Q91WS7 511 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Rbm47Q91WT8 590 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tbc1d21Q9D9D3 336 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 P04213 122 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Apoa4P06728 395 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Uap1l1Q3TW96 507 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Pnliprp1Q5BKQ4 473 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tnpo3Q6P2B1 923 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Magee1Q6PCZ4 918 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Olfr320Q7TRZ4 306 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Lrrtm4Q80XG9 590 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 PstkQ8BP74 359 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Chst8Q8BQ86 417 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ythdf3Q8BYK6 585 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Kdelr3Q8R1L4 214 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 PpidQ9CR16 370 aaKnown RBP12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Fam136aQ9CR98 138 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Chrnb2Q9ERK7 501 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ccdc22Q9JIG7 627 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Sppl2aQ9JJF9 523 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Ascl3Q9JJR7 174 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 H2-BlV9GXR0 257 aa12.72□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Fbxo47A2A6H3 451 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 EnpepP16406 945 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Chrm4P32211 479 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Etv2P41163 335 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Emp1P47801 160 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 ClgnP52194 611 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 TchpQ3TVW5 497 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cpa6Q5U901 438 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Cep78Q6IRU7 790 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 RragdQ7TT45 449 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Znf32Q80V23 272 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Coq4Q8BGB8 266 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Rdh1Q8CGV4 317 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Olfr1Q8VGI1 314 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 EbplQ9D0P0 206 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Nectin1Q9JKF6 515 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 TrehQ9JLT2 576 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Rnf11Q9QYK7 154 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Speer3W4VSP1 261 aa12.71□□□□□ -0.37
Ccdc71-201ENSMUST00000061209 Tgm7A2ART8 616 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 Spdye4cI6XKQ3 339 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 Cyp1a1P00184 524 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 LcatP16301 438 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 Akr1b7P21300 316 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 Bmp8aP34821 399 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 InhbcP55104 352 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 Zzz3Q6KAQ7 910 aa12.71□□□□□ -0.38
Ccdc71-201ENSMUST00000061209 CslQ80X68 466 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms