RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Zfp940Q8R2Q3 566 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Asz1Q8VD46 475 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 AclyQ91V92 1091 aaKnown RBP9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cnot11Q9CWN7 505 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tomm70Q9CZW5 611 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Armc1Q9D7A8 282 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Nufip1Q9QXX8 484 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cyp2g1Q9WV19 494 aa9.55□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm35911A0A1D5RLS7 214 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ankrd16A2AS55 361 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Skint7A7XV04 395 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pole2O54956 527 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Aif1O70200 147 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Surf2P09926 257 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cntn5P68500 1098 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Kcnj13P86046 360 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Smad5P97454 465 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 SobpQ0P5V2 864 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Lingo4Q149C3 593 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 B020004J07RikQ3UTC0 476 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Csnk1g1Q8BTH8 459 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rbm4Q8C7Q4 361 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tprg1Q8CB49 279 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm5591Q8CDK1 855 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn1r18Q8R2C8 299 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rbm4bQ8VE92 357 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr1310Q8VF85 312 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Atoh8Q99NA2 322 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rgs18Q99PG4 235 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Abcb8Q9CXJ4 717 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 MsraQ9D6Y7 233 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Habp4Q9JKS5 411 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Elovl2Q9JLJ4 292 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rpl9-ps6A0A140T8T4 192 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fbxo47A2A6H3 451 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ccdc163A2AGD7 326 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Slc16a8O35308 492 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fkbp7O54998 218 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ap1g1P22892 822 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pou2f3P31362 431 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rpl9P51410 192 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Hyal4Q05A56 481 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rbm15Q0VBL3 962 aaKnown RBP9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 RogdiQ3TDK6 287 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 SbplQ3TUY3 232 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Glb1l2Q3UPY5 636 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mocs1Q5RKZ7 636 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Kpna1Q60960 538 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ppp1r14bQ62084 147 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pik3c3Q6PF93 887 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 TiprlQ8BH58 271 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zbtb9Q8CDC7 459 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 BtdQ8CIF4 520 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr722Q8VFC8 308 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr606Q8VGZ8 319 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Tnfaip8Q921Z5 198 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cyp2j9Q924D1 502 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Clstn3Q99JH7 956 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gstt3Q99L20 241 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ints11Q9CWS4 600 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Wdr55Q9CX97 388 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr671A0A1B0GSN5 317 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn2r94E9PZK8 818 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Obox5G3X9P6 291 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm8926L7MUE8 181 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Dlx2P40764 332 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gadd45aP48316 165 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Nfatc3P97305 1075 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Bpifa6Q0VGU8 367 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Fgfr3Q61851 801 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ube2r2Q6ZWZ2 238 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mfn2Q80U63 757 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 AftphQ80WT5 931 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rcn3Q8BH97 328 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rab15Q8K386 212 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Vmn1r24Q8R2D6 296 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 SarafQ8R3Q0 334 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 NpntQ91V88 561 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Pcdhga6Q91XY2 932 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Eif2b2Q99LD9 351 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Bbs2Q9CWF6 721 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 GrifinQ9D1U0 144 aa9.54□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm13101A2ASJ0 481 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm16494E9Q2Z4 87 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Maml2F6U238 1170 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Gm3138K7N754 218 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 St3gal5O88829 414 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Scg5P12961 212 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Lhx3P50481 400 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cct7P80313 544 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Cxcr5Q04683 374 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Mdga1Q0PMG2 940 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 CenplQ3U3S3 329 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 PtprnQ60673 979 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Nr1d2Q60674 576 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Q6P2K3 674 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Ddx51Q6P9R1 639 aaKnown RBP9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Zfp324Q78F42 583 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Olfr1252Q7TQZ2 314 aa9.53□□□□□ -0.88
Pcdh1-201ENSMUST00000057185 Rbbp8Q80YR6 893 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms