RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 PSKH2Q96QS6 385 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 OR52E6Q96RD3 313 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ZNF300Q96RE9 604 aaPredicted RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 PTPN18Q99952 460 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 BTBD2Q9BX70 525 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 CCSER2Q9H7U1 834 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 KAT8Q9H7Z6 458 aaKnown RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 ELOVL2Q9NXB9 296 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 KLQ9UEF7 1012 aa10.7□□□□□ -0.7
SNIP1-204ENST00000638725 GPC6Q9Y625 555 aaPredicted RBP10.7□□□□□ -0.7
SNIP1-204ENST00000638725 GREB1Q4ZG55 1949 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 F5H5T6 163 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 AREL1O15033 823 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PFDN6O15212 129 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PARNO95453 639 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 FADS2O95864 444 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 B3GALT4O96024 378 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 IGLV3-27P01718 113 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 MT-ND2P03891 347 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 GSNP06396 782 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 RETP07949 1114 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 GSTT2P0CG29 244 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 GSTT2BP0CG30 244 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CR2P20023 1033 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ACVR2AP27037 513 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SLC6A4P31645 630 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CLCN4P51793 760 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SMN1Q16637 294 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 LRRC8DQ7L1W4 858 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ZNF280BQ86YH2 543 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 HIPK1Q86Z02 1210 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 DYNC2LI1Q8TCX1 351 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 RPL3LQ92901 407 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 FAM120BQ96EK7 910 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 UROC1Q96N76 676 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PARK7Q99497 189 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SCUBE2Q9NQ36 999 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 NECTIN3Q9NQS3 549 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 KIAA1522Q9P206 1035 aaPredicted RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PKP3Q9Y446 797 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 TNPO3Q9Y5L0 923 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 TRPM7Q96QT4 1865 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 TRBV5-3A0A0A0MS03 114 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 TAPBPO15533 448 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 RGS14O43566 566 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SEC22BO75396 215 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ESR1P03372 595 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 S100BP04271 92 aaPredicted RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ALOX5P09917 674 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ITGAMP11215 1152 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 MYCLP1P12525 358 aaPredicted RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CD9P21926 228 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 THPOP40225 353 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CLK3P49761 638 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PHC1P78364 1004 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SLC35A2P78381 396 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 IL18R1Q13478 541 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CLCA4Q14CN2 919 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 RFX4Q33E94 735 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CARD16Q5EG05 197 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CATSPEREQ5SY80 951 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 C1QTNF12Q5T7M4 302 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 PLEKHG7Q6ZR37 379 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CEP68Q76N32 757 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 ADAMTSL2Q86TH1 951 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 MINDY2Q8NBR6 621 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 OR52E4Q8NGH9 312 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 REXO5Q96IC2 774 aaKnown RBP10.69□□□□□ -0.7
SNIP1-204ENST00000638725 KLHL25Q9H0H3 589 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 CLMPQ9H6B4 373 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 SPC25Q9HBM1 224 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 FBXO8Q9NRD0 319 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 DHRS7Q9Y394 339 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 RAI2Q9Y5P3 530 aa10.69□□□□□ -0.7
SNIP1-204ENST00000638725 FAM220BPB1ANY3 271 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 M0QX08 132 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 PSMA3P25788 255 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 ARPP19P56211 112 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 RPS24P62847 133 aaKnown RBP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 GTF2H3Q13889 308 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 GBX1Q14549 363 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 HIST2H2ACQ16777 129 aaPredicted RBP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 ZC3H12BQ5HYM0 836 aaKnown RBP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 CPZQ66K79 652 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 SLC22A16Q86VW1 577 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 ZDHHC21Q8IVQ6 265 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 FUBP3Q96I24 572 aaKnown RBP eCLIP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 SH3GL1Q99961 368 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 MYOCQ99972 504 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 BCL7BQ9BQE9 202 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 APOL5Q9BWW9 433 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 DUSP21Q9H596 190 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 MAGIXQ9H6Y5 334 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 C1orf109Q9NX04 203 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 PNMA8BQ9ULN7 279 aaPredicted RBP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 PRG3Q9Y2Y8 225 aaPredicted RBP10.68□□□□□ -0.7
SNIP1-204ENST00000638725 PCDHB5Q9Y5E4 795 aa10.68□□□□□ -0.7
SNIP1-204ENST00000638725 ZFP37Q9Y6Q3 630 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms