RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RPS18P62269 152 aaKnown RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 ACVR1Q04771 509 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 SRSF1Q07955 248 aaKnown RBP eCLIP7.62□□□□□ -1.19
PNKP-229ENST00000637897 ZNF844Q08AG5 666 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 IFFO1Q0D2I5 559 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 GTF2H3Q13889 308 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 POU6F1Q14863 301 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 GPR19Q15760 415 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 ZIC1Q15915 447 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 CEP85LQ5SZL2 805 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 AGBL2Q5U5Z8 902 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 IZUMO3Q5VZ72 239 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 ZNF385CQ66K41 422 aaPredicted RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 PCGF5Q86SE9 256 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 RELL1Q8IUW5 271 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 VRK3Q8IV63 474 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 TRIM48Q8IWZ4 208 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 RBM12BQ8IXT5 1001 aaKnown RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 ADGRF3Q8IZF5 1079 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 OR4E2Q8NGC2 313 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 CT55Q8WUE5 264 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 STARD8Q92502 1023 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 ATP6V1G3Q96LB4 118 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 MENTQ9BUN1 341 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 ULBP3Q9BZM4 244 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 STN1Q9H668 368 aaKnown RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 XKR8Q9H6D3 395 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 GPN2Q9H9Y4 310 aaPredicted RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 TMBIM4Q9HC24 238 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 FAM60AQ9NP50 221 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 LHX9Q9NQ69 397 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 HRASLS2Q9NWW9 162 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 CDYLQ9Y232 598 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 NFS1Q9Y697 457 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 PTPN13Q12923 2485 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 TNRC6AQ8NDV7 1962 aaKnown RBP7.62□□□□□ -1.19
PNKP-229ENST00000637897 NBPF19A0A087WUL8 3843 aa7.62□□□□□ -1.19
PNKP-229ENST00000637897 FLNCQ14315 2725 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 DOPEY2Q9Y3R5 2298 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 C17orf113A0A1B0GUU1 675 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 TCRBV7S3A2A0A539 114 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 SLC5A10A0PJK1 596 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ZNF891A8MT65 544 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 DNALI1O14645 258 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 RIPK2O43353 540 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 SLC28A2O43868 658 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ABCB7O75027 752 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 RASSF9O75901 435 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 CRTAMO95727 393 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 NTRK1P04629 796 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ST6GAL1P15907 406 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 POLR2CP19387 275 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 ARNTP27540 789 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 STIP1P31948 543 aaKnown RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 RPL22P35268 128 aaKnown RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 RORAP35398 523 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 DLSTP36957 453 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 FOXL2P58012 376 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 SEMA5AQ13591 1074 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 IL10RAQ13651 578 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 BOP1Q14137 746 aaKnown RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 GRB7Q14451 532 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 IL11RAQ14626 422 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 MORF4L2Q15014 288 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 TRIP13Q15645 432 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 DEFB109BQ30KR1 87 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 P3H1Q32P28 736 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
PNKP-229ENST00000637897 CRTC2Q53ET0 693 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 TTMPQ5BVD1 217 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 PLEKHS1Q5SXH7 462 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 HIBCHQ6NVY1 386 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 BORAQ6PGQ7 559 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 C6orf15Q6UXA7 325 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 C4orf22Q6V702 233 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 LDB1Q86U70 411 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 PTRH1Q86Y79 214 aaKnown RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 ARFGAP2Q8N6H7 521 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 AVL9Q8NBF6 648 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 OR52E1Q8NGJ3 308 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 OR1L3Q8NH93 324 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 HM13Q8TCT9 377 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 STYXQ8WUJ0 223 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ARL8AQ96BM9 186 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ZDHHC12Q96GR4 267 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ZNF514Q96K75 400 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 TTC25Q96NG3 672 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 COPS8Q99627 209 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ZPBPQ9BS86 351 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 TMEM109Q9BVC6 243 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 TRIM55Q9BYV6 548 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 PITPNM3Q9BZ71 974 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ROPN1BQ9BZX4 212 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 PHACTR1Q9C0D0 580 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 KLHL25Q9H0H3 589 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 STMN4Q9H169 189 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 SLC25A18Q9H1K4 315 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 ROPN1Q9HAT0 212 aaPredicted RBP7.61□□□□□ -1.19
PNKP-229ENST00000637897 CASS4Q9NQ75 786 aa7.61□□□□□ -1.19
PNKP-229ENST00000637897 FGF21Q9NSA1 209 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms