RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 LRRC20Q8TCA0 184 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 PLEKHO2Q8TD55 490 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 SLC2A14Q8TDB8 520 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ATL1Q8WXF7 558 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 TRIB2Q92519 343 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 SMG7Q92540 1137 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 DLG3Q92796 817 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 DNASE1L2Q92874 299 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 LPPQ93052 612 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 MIB2Q96AX9 1013 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 RNFT2Q96EX2 444 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 SLC41A3Q96GZ6 507 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 OXNAD1Q96HP4 312 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 METTL2AQ96IZ6 378 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 ZFYVE19Q96K21 471 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ZNF514Q96K75 400 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 EGLN2Q96KS0 407 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 MRGPRX4Q96LA9 322 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 LURAP1Q96LR2 239 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 FAM227BQ96M60 508 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 COQ10AQ96MF6 247 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 MED15Q96RN5 788 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 CDRT15Q96T59 188 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 PCDHB18PQ96TA0 734 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 CNPY3Q9BT09 278 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 WACQ9BTA9 647 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ADI1Q9BV57 179 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 IFIH1Q9BYX4 1025 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 CPEB1Q9BZB8 566 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 NUF2Q9BZD4 464 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 NDEL1Q9GZM8 345 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 GPR88Q9GZN0 384 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 DNTTIP1Q9H147 329 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 S1PR5Q9H228 398 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 OR52A5Q9H2C5 316 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 OSGEPL1Q9H4B0 414 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 EPB41L1Q9H4G0 881 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 FBXO44Q9H4M3 255 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 DHX33Q9H6R0 707 aaKnown RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 WDCPQ9H6R7 721 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 RIOX1Q9H6W3 641 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 L2HGDHQ9H9P8 463 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 FN3KRPQ9HA64 309 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 CHRAC1Q9NRG0 131 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ELOVL2Q9NXB9 296 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 PDP1Q9P0J1 537 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 POLKQ9UBT6 870 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 RGS17Q9UGC6 210 aaPredicted RBP2.95□□□□□ -1.94
VIM-210ENST00000637053 SCOCQ9UIL1 159 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 CDH22Q9UJ99 828 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 HAO1Q9UJM8 370 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 MID2Q9UJV3 735 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 GGA2Q9UJY4 613 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 MYO6Q9UM54 1294 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 CNTN6Q9UQ52 1028 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 NIP7Q9Y221 180 aaKnown RBP eCLIP2.95□□□□□ -1.94
VIM-210ENST00000637053 AP3M1Q9Y2T2 418 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 IFT52Q9Y366 437 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 B3GALT1Q9Y5Z6 326 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ZHX2Q9Y6X8 837 aa2.95□□□□□ -1.94
VIM-210ENST00000637053 ELP1O95163 1332 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 AOX1Q06278 1338 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CCDC171Q6TFL3 1326 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 NCAPD2Q15021 1401 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 LOC100509620A0A075B734 347 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 C17orf102A2RUQ5 167 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 ARHGEF35A5YM69 484 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 GOLGA6L9A6NEM1 432 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 NPIPB13A6NJU9 1138 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 FAM90A7PA6NKC0 464 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 SH2D7A6NKC9 451 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 BECN2A8MW95 431 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 FAM90A22PA8MWA6 464 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 EFCAB8A8MWE9 144 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 FAM90A12PA8MX19 464 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 FAM90A23PA8MXZ1 464 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 NPIPB4C9JG80 1138 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 H0YJX3 145 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 AGPSO00116 658 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 TLR4O00206 839 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 QSOX1O00391 747 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CES2O00748 559 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 SCAMP2O15127 329 aaKnown RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 AP5Z1O43299 807 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 TLX3O43711 291 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 KLK8O60259 260 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 HBP1O60381 514 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CDH16O75309 829 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 SNNO75324 88 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 VPS4BO75351 444 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 SAP30O75446 220 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 GPX5O75715 221 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 KDM4BO94953 1096 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 RPP14O95059 124 aaKnown RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 SNAI1O95863 264 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 MBD3O95983 291 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 FUCA1P04066 466 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CFIP05156 583 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 UGT2B4P06133 528 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CAPN1P07384 714 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms