RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MATN4O95460 622 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CATP04040 527 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 ALDOAP04075 364 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 SHBGP04278 402 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 LTA4HP09960 611 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CDK4P11802 303 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NID1P14543 1247 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 KRT15P19012 456 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CYP2A7P20853 494 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CCR7P32248 378 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CA5AP35218 305 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 HSD17B2P37059 387 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 DUSP3P51452 185 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 EPHA4P54764 986 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TAS2R39P59534 338 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NR1D2Q14995 579 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 ARHGAP19Q14CB8 494 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NAA25Q14CX7 972 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 EFTUD2Q15029 972 aaKnown RBP eCLIP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 HLA-BQ31612 363 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TNFAIP8L3Q5GJ75 292 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 RBM20Q5T481 1227 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CAPRIN2Q6IMN6 1127 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TTC23LQ6PF05 361 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 DET1Q7L5Y6 550 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TAF8Q7Z7C8 310 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 LDB1Q86U70 411 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NRROSQ86YC3 692 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 RASGRP3Q8IV61 690 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 DCUN1D3Q8IWE4 304 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 CARFQ8N187 725 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 RAB42Q8N4Z0 105 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 GPR156Q8NFN8 814 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 OR5K2Q8NHB8 316 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 WDR48Q8TAF3 677 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 MZB1Q8WU39 189 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NAT6Q93015 286 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TSACCQ96A04 125 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 ZIM3Q96PE6 472 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 GPR21Q99679 349 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 DPYSL5Q9BPU6 564 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TRIM54Q9BYV2 358 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TMEM168Q9H0V1 697 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 OR52A5Q9H2C5 316 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 OSGEPL1Q9H4B0 414 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 RDH14Q9HBH5 336 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 NMRAL1Q9HBL8 299 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 SARS2Q9NP81 518 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TMEM9BQ9NQ34 198 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 MRPL40Q9NQ50 206 aaKnown RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 SNX15Q9NRS6 342 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 KLC4Q9NSK0 619 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 SPATA7Q9P0W8 599 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 TAAR2Q9P1P5 351 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 SLC39A10Q9ULF5 831 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 ACOT9Q9Y305 439 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 PRSS21Q9Y6M0 314 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 COLEC10Q9Y6Z7 277 aa6.56□□□□□ -1.36
UPF3B-205ENST00000636792 ARID1BQ8NFD5 2236 aaPredicted RBP6.56□□□□□ -1.36
UPF3B-205ENST00000636792 A0A096LPK6 155 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 HMX2A2RU54 273 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SYCE1LA8MT33 242 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 PDZK1P1A8MUH7 402 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GFYI3L273 518 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RGS16O15492 202 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 PSIP1O75475 530 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 IPO13O94829 963 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 KLHL2O95198 593 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 TSPAN12O95859 305 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 FUCA1P04066 466 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 C2P06681 752 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GP1BAP07359 652 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RBP1P09455 135 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SLC35E2BP0CK96 405 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ERGP11308 486 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 MTHFD1P11586 935 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CCND1P24385 295 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ACADLP28330 430 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SHMT2P34897 504 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ADH7P40394 386 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GPR3P46089 330 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CCT5P48643 541 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 HNMTP50135 292 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SLC18A1P54219 525 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CDKN2DP55273 166 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 RAC1P63000 192 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 UBE2IP63279 158 aaKnown RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 IRX4P78413 519 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 GPLD1P80108 840 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 HSPA14Q0VDF9 509 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ILKQ13418 452 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 NFE2L1Q14494 772 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 ACAP2Q15057 778 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 SHBQ15464 509 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 LPAL2Q16609 132 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CCDC153Q494R4 210 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 AASDHQ4L235 1098 aaPredicted RBP6.55□□□□□ -1.36
UPF3B-205ENST00000636792 C14orf28Q4W4Y0 310 aa6.55□□□□□ -1.36
UPF3B-205ENST00000636792 CEP85LQ5SZL2 805 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms