RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 BIRC8Q96P09 236 aa19.48■□□□□ 0.71
R3HCC1-210ENST00000625275 CYTH2Q99418 400 aa19.48■□□□□ 0.71
R3HCC1-210ENST00000625275 TIMM29Q9BSF4 260 aa19.48■□□□□ 0.71
R3HCC1-210ENST00000625275 ASPSCR1Q9BZE9 553 aa19.48■□□□□ 0.71
R3HCC1-210ENST00000625275 NSMCE4AQ9NXX6 385 aa19.48■□□□□ 0.71
R3HCC1-210ENST00000625275 AP2A2O94973 939 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 ITGB2P05107 769 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 RPS3P23396 243 aaKnown RBP eCLIP19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 PRLHRP49683 370 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 UBE2IP63279 158 aaKnown RBP19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 BCL7AQ4VC05 210 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 CTSL3PQ5NE16 218 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 ARHGAP22Q7Z5H3 698 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 C11orf96Q7Z7L8 435 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 LRRC6Q86X45 466 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 MREGQ8N565 214 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 BMPERQ8N8U9 685 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 JPH3Q8WXH2 748 aaPredicted RBP19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 ZNF514Q96K75 400 aaPredicted RBP19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 MCMBPQ9BTE3 642 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 SLC23A2Q9UGH3 650 aa19.47■□□□□ 0.71
R3HCC1-210ENST00000625275 A8MU76 341 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 ERLIN1O75477 346 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 WT1P19544 449 aaPredicted RBP19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 FMO4P31512 558 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 NAB1Q13506 487 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 DCAF12Q5T6F0 453 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 ANKS6Q68DC2 871 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 ZNF549Q6P9A3 640 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 NKD1Q969G9 470 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 CPNE1Q99829 537 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 TBC1D10AQ9BXI6 508 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 UCK1Q9HA47 277 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 SCHIP1Q9P0W5 487 aaPredicted RBP19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 GNPTGQ9UJJ9 305 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 DNAJC16Q9Y2G8 782 aa19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 MN1Q10571 1320 aaPredicted RBP19.46■□□□□ 0.71
R3HCC1-210ENST00000625275 PRR19A6NJB7 356 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 PDZK1P1A8MUH7 402 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 FAM155BO75949 473 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 ESR1P03372 595 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 XRCC1P18887 633 aaPredicted RBP19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 CD151P48509 253 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 KLHL38Q2WGJ6 581 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 ZC3HC1Q86WB0 502 aaKnown RBP19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 TRIM48Q8IWZ4 208 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 MRRFQ96E11 262 aaKnown RBP19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 TEFMQ96QE5 360 aaKnown RBP19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 TXNDC16Q9P2K2 825 aa19.45■□□□□ 0.7
R3HCC1-210ENST00000625275 EXOC1LA0A1B0GW35 172 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 IQCF5A8MTL0 148 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 QSOX1O00391 747 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 SHBGP04278 402 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 OR56A5P0C7T3 313 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 GP5P40197 560 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 SEPT7Q16181 437 aaKnown RBP19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 LINC00303Q3SY05 128 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 PTRHD1Q6GMV3 140 aaKnown RBP19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 TMEM26Q6ZUK4 368 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 PLXDC1Q8IUK5 500 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 IL22RA1Q8N6P7 574 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 LKAAEAR1Q8TD35 194 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 EXTL1Q92935 676 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 NDNQ99608 321 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 RBBP8Q99708 897 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 RHOJQ9H4E5 214 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 ZNF624Q9P2J8 865 aaPredicted RBP19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 KLHL3Q9UH77 587 aa19.44■□□□□ 0.7
R3HCC1-210ENST00000625275 NIPSNAP2O75323 286 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 POP7O75817 140 aaKnown RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 VIPP01282 170 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 PKMP14618 531 aaKnown RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 PBLDP30039 288 aaPredicted RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 SLC19A1P41440 591 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 CSE1LP55060 971 aaKnown RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 MC2RQ01718 297 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 BEND6Q5SZJ8 279 aaPredicted RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 RBM20Q5T481 1227 aaKnown RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 XKR5Q6UX68 686 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 CACNA2D3Q8IZS8 1091 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 KRT222Q8N1A0 295 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 EXD3Q8N9H8 876 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 SLC44A1Q8WWI5 657 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 VPS39Q96JC1 886 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 LINC00615Q96LM1 132 aaPredicted RBP19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 PAFAH2Q99487 392 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 ARHGAP9Q9BRR9 750 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 CCDC68Q9H2F9 335 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 MED16Q9Y2X0 877 aa19.43■□□□□ 0.7
R3HCC1-210ENST00000625275 B8ZZF3 427 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 POC1B-GALNT4F8VUJ3 575 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 RAD1O60671 282 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 FTH1P02794 183 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 ANKRD34CP0C6C1 535 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 VCLP18206 1134 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 ITGB6P18564 788 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 AGAP9Q5VTM2 703 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 ABRAXAS1Q6UWZ7 409 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 CEACAM20Q6UY09 585 aa19.42■□□□□ 0.7
R3HCC1-210ENST00000625275 WASH2PQ6VEQ5 465 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms