RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SAGP10523 405 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 TCF4P15884 667 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 CKMT2P17540 419 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 GNAZP19086 355 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ACAT1P24752 427 aaKnown RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 IL15P40933 162 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 UBASH3AP57075 661 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 YWHAHQ04917 246 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 GAGE5Q13069 117 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 GAGE6Q13070 117 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 CUL3Q13618 768 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 SLMAPQ14BN4 828 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 SLC39A14Q15043 492 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 KIF19Q2TAC6 998 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ASPRV1Q53RT3 343 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 TCTE1Q5JU00 501 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 SLC10A5Q5PT55 438 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 IRAK1BP1Q5VVH5 260 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 UNQ6126/PRO20091Q6UXV3 157 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 OTOAQ7RTW8 1153 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 TRIML1Q8N9V2 468 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 GRAPLQ8TC17 118 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-213ENST00000622183 SCARB1Q8WTV0 552 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 CCDC107Q8WV48 283 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 SGK494Q96LW2 274 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 DNAI2Q9GZS0 605 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ARRDC1-AS1Q9H2J1 176 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ERAP1Q9NZ08 941 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 CDH7Q9ULB5 785 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 LIPT1Q9Y234 373 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 KCNK7Q9Y2U2 307 aa4.63□□□□□ -1.67
CPNE3-213ENST00000622183 ASPDHA6ND91 283 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 C5orf52A6NGY3 159 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 GAPDHSO14556 408 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 SLC30A4O14863 429 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 SMAD6O43541 496 aaKnown RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 SYNGR3O43761 229 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 MOCS3O95396 460 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 PPP1R3DO95685 299 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 INHBAP08476 426 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 HAPLN1P10915 354 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 EPCAMP16422 314 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 PTGER4P35408 488 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 FUT6P51993 359 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 THOP1P52888 689 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 RPS18P62269 152 aaKnown RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 CX3CL1P78423 397 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 DLK1P80370 383 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 ITGA7Q13683 1181 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 NFE2L1Q14494 772 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 RRS1Q15050 365 aaKnown RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 CDO1Q16878 200 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 FAM174BQ3ZCQ3 159 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 STXBP5Q5T5C0 1151 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 ENPP7Q6UWV6 458 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 TUBA1AQ71U36 451 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 NUP54Q7Z3B4 507 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 FAM219AQ8IW50 185 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 CCDC170Q8IYT3 715 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 NUP93Q8N1F7 819 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 TMCO5AQ8N6Q1 288 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 ZNF713Q8N859 430 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 NPEPL1Q8NDH3 523 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 OR13J1Q8NGT2 312 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 FIBINQ8TAL6 211 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 FGFBP3Q8TAT2 258 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 GRK7Q8WTQ7 553 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 TUBA1CQ9BQE3 449 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 LRRC1Q9BTT6 524 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 POLR3CQ9BUI4 534 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 LRRC4Q9HBW1 653 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 APOBEC3GQ9HC16 384 aaKnown RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 CD93Q9NPY3 652 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 TCF7L2Q9NQB0 619 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 ZNF701Q9NV72 531 aaPredicted RBP4.62□□□□□ -1.67
CPNE3-213ENST00000622183 PCDH11YQ9BZA8 1340 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 TTC3P53804 2025 aa4.62□□□□□ -1.67
CPNE3-213ENST00000622183 SAA2-SAA4A0A096LPE2 208 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 A0A1W2PPI3 338 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 A0A1W2PPK0 400 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 A0A1W2PRB8 838 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 A4D1N5 150 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 LACTBL1A8MY62 500 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 BAG4O95429 457 aaKnown RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 TIA1P31483 386 aaKnown RBP eCLIP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ART1P52961 327 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 EEF1A2Q05639 463 aaKnown RBP4.61□□□□□ -1.67
CPNE3-213ENST00000622183 KIR2DS3Q14952 304 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 NPTX1Q15818 432 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 CA9Q16790 459 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ELFN2Q5R3F8 820 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 C9orf57Q5W0N0 161 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 NOTUMQ6P988 496 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 C16orf82Q7Z2V1 217 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ARMC9Q7Z3E5 817 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ARHGAP22Q7Z5H3 698 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 CCDC91Q7Z6B0 441 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 NUDT13Q86X67 352 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 CFAP206Q8IYR0 622 aa4.61□□□□□ -1.67
CPNE3-213ENST00000622183 ANKRD13CQ8N6S4 541 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms