RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RPF2Q9H7B2 306 aaKnown RBP17.1■□□□□ 0.33
FAM3A-222ENST00000621967 CLEC4EQ9ULY5 219 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 ZNF711Q9Y462 761 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 TNPO3Q9Y5L0 923 aaKnown RBP17.1■□□□□ 0.33
FAM3A-222ENST00000621967 PLXNB3Q9ULL4 1909 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 TICRRQ7Z2Z1 1910 aa17.1■□□□□ 0.33
FAM3A-222ENST00000621967 RNF103-CHMP3A0A140T963 221 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 SNAP91O60641 907 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 TRMUO75648 421 aaKnown RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 NCK1P16333 377 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 GJA4P35212 333 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 HTR6P50406 440 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 INO80DQ53TQ3 878 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 DLEU7Q6UYE1 221 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 EID2BQ96D98 161 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 CDK15Q96Q40 435 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 ACTL8Q9H568 366 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 OCEL1Q9H607 264 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 TIMMDC1Q9NPL8 285 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 KIAA1522Q9P206 1035 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 ATXN10Q9UBB4 475 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 A0A087WXM4 84 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 IQCF5A8MTL0 148 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 IFRD1O00458 451 aaPredicted RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 OR7A17O14581 309 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 ANKRD28O15084 1053 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 CAPN1P07384 714 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 HMGCLP35914 325 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 FUT11Q495W5 492 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 CERS6Q6ZMG9 384 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 TAS2R42Q7RTR8 314 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 GOLGA7Q7Z5G4 137 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 DCBLD1Q8N8Z6 715 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 PDPRQ8NCN5 879 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 MAGEE1Q9HCI5 957 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 ABCB8Q9NUT2 735 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 FNDC3AQ9Y2H6 1198 aaKnown RBP17.09■□□□□ 0.33
FAM3A-222ENST00000621967 PCDHB3Q9Y5E6 796 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 COL4A3Q01955 1670 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 MYO10Q9HD67 2058 aa17.09■□□□□ 0.33
FAM3A-222ENST00000621967 A0A0U1RQS6 177 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 LSM1O15116 133 aaKnown RBP17.08■□□□□ 0.33
FAM3A-222ENST00000621967 GPR39O43194 453 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 NARSO43776 548 aaKnown RBP17.08■□□□□ 0.33
FAM3A-222ENST00000621967 TULP3O75386 442 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 RPS3P23396 243 aaKnown RBP eCLIP17.08■□□□□ 0.33
FAM3A-222ENST00000621967 HLA-FP30511 346 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 CSKP41240 450 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 DGKGP49619 791 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 RPS6KA3P51812 740 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 CDH15P55291 814 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 OR4D2P58180 307 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 LMAN2Q12907 356 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 SLC2A7Q6PXP3 512 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 ARHGAP22Q7Z5H3 698 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 C12orf40Q86WS4 652 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 ERI1Q8IV48 349 aaKnown RBP17.08■□□□□ 0.33
FAM3A-222ENST00000621967 METTL6Q8TCB7 284 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 BIRC7Q96CA5 298 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 SARS2Q9NP81 518 aaKnown RBP17.08■□□□□ 0.33
FAM3A-222ENST00000621967 TRPV5Q9NQA5 729 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 DEC1Q9P2X7 70 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 USP22Q9UPT9 525 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 PKP3Q9Y446 797 aa17.08■□□□□ 0.33
FAM3A-222ENST00000621967 GOLGA8CPA6NN73 597 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 EI24O14681 340 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 SRFP11831 508 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 CD70P32970 193 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 TRAF3Q13114 568 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 GTF2H2Q13888 395 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 GRAMD4Q6IC98 578 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 GTF2H2CQ6P1K8 395 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 TTC33Q6PID6 262 aaPredicted RBP17.08■□□□□ 0.32
FAM3A-222ENST00000621967 FRA10AC1Q70Z53 315 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 LPCAT2Q7L5N7 544 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 ETFBKMTQ8IXQ9 262 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 OR4F6Q8NGB9 312 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 SMPD3Q9NY59 655 aaPredicted RBP17.08■□□□□ 0.32
FAM3A-222ENST00000621967 MAGEL2Q9UJ55 1249 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 NEUROG3Q9Y4Z2 214 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 PCDHB9Q9Y5E1 797 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 OR51B4Q9Y5P0 310 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 SLC30A1Q9Y6M5 507 aa17.08■□□□□ 0.32
FAM3A-222ENST00000621967 GAPDHSO14556 408 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-222ENST00000621967 LDLRP01130 860 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 PABPC1P11940 636 aaKnown RBP17.07■□□□□ 0.32
FAM3A-222ENST00000621967 BMP1P13497 986 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 JAK1P23458 1154 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 MZF1P28698 734 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-222ENST00000621967 CAPGP40121 348 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 CASP2P42575 452 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 SOX9P48436 509 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 C18orf21Q32NC0 220 aaPredicted RBP17.07■□□□□ 0.32
FAM3A-222ENST00000621967 CYBRD1Q53TN4 286 aa17.07■□□□□ 0.32
FAM3A-222ENST00000621967 CYP20A1Q6UW02 462 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms