RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 LOC101059948A0A1B0GTJ6 334 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 GTPBP10A4D1E9 387 aaKnown RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PRR32B1ATL7 298 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PTGES3LE9PB15 166 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SLCO1B7G3V0H7 640 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SSX4O60224 188 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PLOD3O60568 738 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 MOCS3O95396 460 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PIGNO95427 931 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 IGHDP01880 384 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 EFNA1P20827 205 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 CA4P22748 312 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SP100P23497 879 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 RAD52P43351 418 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SNX16P57768 344 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 CX3CL1P78423 397 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 TMF1P82094 1093 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 KRT33BQ14525 404 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SPATA1Q5VX52 437 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PIGZQ86VD9 579 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF614Q8N883 585 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 OR2AJ1Q8NGZ0 328 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 RNF128Q8TEB7 428 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 CCDC47Q96A33 483 aaKnown RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 NSL1Q96IY1 281 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 IWS1Q96ST2 819 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 MCRIP2Q9BUT9 160 aaKnown RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 AP1M1Q9BXS5 423 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 CHMP1AQ9HD42 196 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 RNF186Q9NXI6 227 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 LARSQ9P2J5 1176 aaKnown RBP3.82□□□□□ -1.8
BRCA1-229ENST00000621897 PLAGL1Q9UM63 463 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 SMAD5-AS1Q9Y6J3 95 aa3.82□□□□□ -1.8
BRCA1-229ENST00000621897 GAPDHSO14556 408 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-229ENST00000621897 PAPSS1O43252 624 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-229ENST00000621897 DUS4LO95620 317 aaKnown RBP3.81□□□□□ -1.8
BRCA1-229ENST00000621897 MFAP4P55083 255 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 DSCR10P59022 87 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 CXCL9Q07325 125 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 HNRNPDQ14103 355 aaKnown RBP3.81□□□□□ -1.8
BRCA1-229ENST00000621897 MDH1BQ5I0G3 518 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 SLC10A5Q5PT55 438 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 LCA5Q86VQ0 697 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 DCLK2Q8N568 766 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 FGFBP3Q8TAT2 258 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 RTN4RQ9BZR6 473 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 DPAGT1Q9H3H5 408 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 BLOC1S4Q9NUP1 217 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 NKIRAS2Q9NYR9 191 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 MTUS1Q9ULD2 1270 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 TMCC3Q9ULS5 477 aa3.81□□□□□ -1.8
BRCA1-229ENST00000621897 TDRD15B5MCY1 1934 aaKnown RBP3.81□□□□□ -1.8
BRCA1-229ENST00000621897 A0A1W2PN81 502 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 HYKKA2RU49 373 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 LRRC72A6NJI9 287 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 DCXO43602 365 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 GPIP06744 558 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 GLULP15104 373 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF10P21506 573 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 CHRNA7P36544 502 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 MAGEA11P43364 429 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 TEAD2Q15562 447 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 FAAP20Q6NZ36 180 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF613Q6PF04 617 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 PSRC1Q6PGN9 363 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 IL27RAQ6UWB1 636 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 C4orf50Q6ZRC1 276 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 LDB1Q86U70 411 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 SNX32Q86XE0 403 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 CEP57L1Q8IYX8 460 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 ARL6IP6Q8N6S5 226 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 LSMEM1Q8N8F7 131 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 BMPERQ8N8U9 685 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 TRIML1Q8N9V2 468 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 OR13J1Q8NGT2 312 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 AFAP1L1Q8TED9 768 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 RSRC1Q96IZ7 334 aaKnown RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 RBM4BQ9BQ04 359 aaKnown RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 SDR39U1Q9NRG7 319 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 WSB2Q9NYS7 404 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 SEC63Q9UGP8 760 aaKnown RBP3.8□□□□□ -1.8
BRCA1-229ENST00000621897 HACL1Q9UJ83 578 aa3.8□□□□□ -1.8
BRCA1-229ENST00000621897 C19orf81C9J6K1 198 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 AP3D1O14617 1153 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 VILLO15195 856 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 XRCC3O43542 346 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 KHDRBS3O75525 346 aaKnown RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 PRKRAO75569 313 aaKnown RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ZWINTO95229 277 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 GABRA5P31644 462 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 SLC15A1P46059 708 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 TDO2P48775 406 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 ZNF131P52739 623 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 CTU2Q2VPK5 515 aaKnown RBP3.79□□□□□ -1.8
BRCA1-229ENST00000621897 KLHL26Q53HC5 615 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 RAB41Q5JT25 222 aa3.79□□□□□ -1.8
BRCA1-229ENST00000621897 CCDC158Q5M9N0 1113 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms