RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 VAPAQ9P0L0 249 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ZNF112Q9UJU3 913 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 LYVE1Q9Y5Y7 322 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 RGPD3A6NKT7 1758 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 RGPD4Q7Z3J3 1758 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 KIAA0513O60268 411 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ERN1O75460 977 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ITGB1P05556 798 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 STSP08842 583 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 UBA1P22314 1058 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 CLCN5P51795 746 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 CYP4F8P98187 520 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 PTGR1Q14914 329 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 QPRTQ15274 297 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 CDONQ4KMG0 1287 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 Q5BKY6 102 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ZMAT1Q5H9K5 638 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 PRSS36Q5K4E3 855 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 SIMC1Q8NDZ2 872 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 TMCO6Q96DC7 493 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 SIPA1Q96FS4 1042 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ST6GAL2Q96JF0 529 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 BTN2A3PQ96KV6 586 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 ULBP1Q9BZM6 244 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 SLA2Q9H6Q3 261 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 FKBP14Q9NWM8 211 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 FBXL12Q9NXK8 326 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 TRAV19A0A0A6YYK7 116 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 TREHO43280 583 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 PLA2G6O60733 806 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 OR7A10O76100 309 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 GUCA1CO95843 209 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 POU2F1P14859 743 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 MYL9P24844 172 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 KRT20P35900 424 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 WNT3AP56704 352 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 AP5B1Q2VPB7 878 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 PYDC2Q56P42 97 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 SVOPLQ8N434 492 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 OR52J3Q8NH60 311 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 VANGL1Q8TAA9 524 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 TAS2R16Q9NYV7 291 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 MKLN1Q9UL63 735 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 TIMM13Q9Y5L4 95 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 GPR45Q9Y5Y3 372 aa9.59□□□□□ -0.87
TNFAIP3-210ENST00000620204 B8ZZF3 427 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 MYL3P08590 195 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 SLC10A3P09131 477 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 EMX2Q04743 252 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 LCP2Q13094 533 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 NFE2L1Q14494 772 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 LAIR2Q6ISS4 152 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 RIOX2Q8IUF8 465 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 LSMEM1Q8N8F7 131 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TP53INP1Q96A56 240 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 KLHL5Q96PQ7 755 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 DPY30Q9C005 99 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TRIM45Q9H8W5 580 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 CCNB1IP1Q9NPC3 277 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 MARCH4Q9P2E8 410 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 SHROOM3Q8TF72 1996 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 FER1L6Q2WGJ9 1857 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 H3BM21 787 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 PLD2O14939 933 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 NCAM2O15394 837 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 STX7O15400 261 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 PSIP1O75475 530 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TSPAN19P0C672 248 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 COL6A1P12109 1028 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 AKAP5P24588 427 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 ATP4BP51164 291 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 GEMP55040 296 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 NKX3-2P78367 333 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 SLC35A2P78381 396 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 CREMQ03060 361 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 OR4D1Q15615 310 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 RFX4Q33E94 735 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 GPAT3Q53EU6 434 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZDHHC17Q8IUH5 632 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 YIPF7Q8N8F6 280 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 YIPF6Q96EC8 236 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 DIRAS2Q96HU8 199 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TTPALQ9BTX7 342 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 GOLGA2P5Q9HBQ8 144 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 ZNF490Q9ULM2 529 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 A0A1W2PQ09 198 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 PABPN1LA6NDY0 278 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 PLK4O00444 970 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 POLR1CO15160 346 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 DNAJB5O75953 348 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 LRATO95237 230 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TP53P04637 393 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 PGRP06401 933 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 IQCF3P0C7M6 154 aa9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 EFNA1P20827 205 aaPredicted RBP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 RPS3P23396 243 aaKnown RBP eCLIP9.58□□□□□ -0.88
TNFAIP3-210ENST00000620204 TNFSF8P32971 234 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms