RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 SLC10A2Q12908 348 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 KCNC3Q14003 757 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 RAB41Q5JT25 222 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 KIAA2013Q8IYS2 634 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TERB1Q8NA31 727 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 OR9A1PQ8NGU1 263 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF563Q8TA94 476 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 EEF1AKMT1Q8WVE0 214 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PYCR2Q96C36 320 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 CMTM7Q96FZ5 175 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 REXO5Q96IC2 774 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MTERF1Q99551 399 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TBC1D10AQ9BXI6 508 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 EBPLQ9BY08 206 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ZBP1Q9H171 429 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 LINC00597Q9H2U6 94 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MUC13Q9H3R2 512 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 HCSTQ9UBK5 93 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 LAMB2P55268 1798 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 A8MT66 165 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PDPK1O15530 556 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PSMG1O95456 288 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 BMP7P18075 431 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MYL12AP19105 171 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PRDX6P30041 224 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SHMT2P34897 504 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 IGFALSP35858 605 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 UGT2B15P54855 530 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 TAS2R50P59544 299 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 GPX6P59796 221 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MLLT1Q03111 559 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MTAPQ13126 283 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 MSS51Q4VC12 460 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 CCDC92Q53HC0 331 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 PHF19Q5T6S3 580 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 VN1R5Q7Z5H4 357 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 THOC6Q86W42 341 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 HLA-CQ95604 372 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SCAMP4Q969E2 229 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 KIAA1191Q96A73 305 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 ADI1Q9BV57 179 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC46A2Q9BY10 475 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 NCDNQ9UBB6 729 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 SEC14L3Q9UDX4 400 aa9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 CFAP20Q9Y6A4 193 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-208ENST00000615606 LINC01553A4QN01 128 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PEX1O43933 1283 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PCDH7O60245 1069 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SRCP12931 536 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 CSTF2P33240 577 aaKnown RBP eCLIP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TIFABQ6ZNK6 161 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 OFCC1Q8IZS5 231 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 UBR7Q8N806 425 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SHKBP1Q8TBC3 707 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PPM1MQ96MI6 270 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 NMUR2Q9GZQ4 415 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DGKBQ9Y6T7 804 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DDX60LQ5H9U9 1706 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 LAMB1P07942 1786 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 ARAP2Q8WZ64 1704 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DHRS12A0PJE2 317 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 FOXO6A8MYZ6 492 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 K7ERQ8 282 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SCN2BO60939 215 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 FAM58BPP0C7Q3 252 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SPIBQ01892 262 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 CYP4F3Q08477 520 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 AGTRAPQ6RW13 159 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DEF8Q6ZN54 512 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PIM3Q86V86 326 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 OR4E2Q8NGC2 313 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 HBEGFQ99075 208 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 KATNBL1Q9H079 304 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 VPS29Q9UBQ0 182 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 A0A0J9YVX5 310 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 ZCCHC18P0CG32 403 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PTX3P26022 381 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 RPL4P36578 427 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 MASP1P48740 699 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TAS2R41P59536 307 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SPIN4Q56A73 249 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TTC23Q5W5X9 447 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 FRG2Q64ET8 278 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TYW3Q6IPR3 259 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 GALNT18Q6P9A2 607 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 RNF44Q7L0R7 432 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TMC8Q8IU68 726 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 RASGRP3Q8IV61 690 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 C11orf65Q8NCR3 313 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PYDC1Q8WXC3 89 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC38A2Q96QD8 506 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 FRG2BQ96QU4 278 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 NDC1Q9BTX1 674 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms