RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SLC7A5Q01650 507 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 FOXM1Q08050 763 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 CLN3Q13286 438 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 PLEKHS1Q5SXH7 462 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 TMEM164Q5U3C3 297 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 ARMC6Q6NXE6 501 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 FBXO36Q8NEA4 188 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 SKA2Q8WVK7 121 aaPredicted RBP16.23■□□□□ 0.19
CBWD3-211ENST00000615061 PPANQ9NQ55 473 aaKnown RBP16.23■□□□□ 0.19
CBWD3-211ENST00000615061 WHRNQ9P202 907 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 SEMA5BQ9P283 1151 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 ACSL6Q9UKU0 697 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 VPS9D1Q9Y2B5 631 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 PCDHGA3Q9Y5H0 932 aa16.23■□□□□ 0.19
CBWD3-211ENST00000615061 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 H3BMM5 538 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 CARSP49589 748 aaKnown RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 CLCN7P51798 805 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 CKAP4Q07065 602 aaKnown RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 PRKAA1Q13131 559 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 SRSF6Q13247 344 aaKnown RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 CUL1Q13616 776 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 GRB7Q14451 532 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 GBX1Q14549 363 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 ACSBG2Q5FVE4 666 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 DCAF12Q5T6F0 453 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 STEAP4Q687X5 459 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 LMNTD2Q8IXW0 634 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 SIDT2Q8NBJ9 832 aaKnown RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 C2CD4AQ8NCU7 369 aaPredicted RBP16.22■□□□□ 0.19
CBWD3-211ENST00000615061 LRRC39Q96DD0 335 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 ELMO2Q96JJ3 720 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 OR6C1Q96RD1 312 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 NDNQ99608 321 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 FBXO8Q9NRD0 319 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 SPHK1Q9NYA1 384 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 POMT2Q9UKY4 750 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 ATRXP46100 2492 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 PCM1Q15154 2024 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 PIEZO2Q9H5I5 2752 aa16.22■□□□□ 0.19
CBWD3-211ENST00000615061 KPNA5O15131 536 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 POLR1CO15160 346 aaPredicted RBP16.21■□□□□ 0.19
CBWD3-211ENST00000615061 FOLR1P15328 257 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 PRDX3P30048 256 aaKnown RBP16.21■□□□□ 0.19
CBWD3-211ENST00000615061 BDKRB1P46663 353 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 RAB15P59190 212 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 CCSMST1Q4G0I0 132 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 CAPN12Q6ZSI9 719 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 CNTN4Q8IWV2 1026 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 ZBED8Q8IZ13 594 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 ZBTB2Q8N680 514 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 BBOF1Q8ND07 529 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 GSDMBQ8TAX9 411 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 UBXN4Q92575 508 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 SLC41A2Q96JW4 573 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 IL17FQ96PD4 163 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 MENTQ9BUN1 341 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 DDA1Q9BW61 102 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 KLHL25Q9H0H3 589 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 POLG2Q9UHN1 485 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 UTP11Q9Y3A2 253 aaKnown RBP16.21■□□□□ 0.19
CBWD3-211ENST00000615061 MRFAP1Q9Y605 127 aa16.21■□□□□ 0.19
CBWD3-211ENST00000615061 ESYT3A0FGR9 886 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 AHSGP02765 367 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 EBLN1P0CF75 366 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 PVRP15151 417 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 PLTPP55058 493 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 WHAMMP3Q1A5X7 153 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 TEDDM1Q5T9Z0 273 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 UNC5DQ6UXZ4 953 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 DCUN1D3Q8IWE4 304 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 C2orf73Q8N5S3 287 aaPredicted RBP16.21■□□□□ 0.18
CBWD3-211ENST00000615061 CD180Q99467 661 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 GPR21Q99679 349 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 LRRC1Q9BTT6 524 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 ASPSCR1Q9BZE9 553 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 CCDC68Q9H2F9 335 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 LATS2Q9NRM7 1088 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 ACTR10Q9NZ32 417 aa16.21■□□□□ 0.18
CBWD3-211ENST00000615061 RALYQ9UKM9 306 aaKnown RBP16.21■□□□□ 0.18
CBWD3-211ENST00000615061 PIPSLA2A3N6 862 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 SLC9B1P1A6NJY1 282 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 PIAS1O75925 651 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 C1orf105O95561 183 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 LIPCP11150 499 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 CDH3P22223 829 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 PEBP1P30086 187 aaKnown RBP16.2■□□□□ 0.18
CBWD3-211ENST00000615061 SHMT2P34897 504 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 PGGT1BP53609 377 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 TIAL1Q01085 375 aaKnown RBP eCLIP16.2■□□□□ 0.18
CBWD3-211ENST00000615061 KLHL38Q2WGJ6 581 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 RBM20Q5T481 1227 aaKnown RBP16.2■□□□□ 0.18
CBWD3-211ENST00000615061 C8orf74Q6P047 294 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 TRIM73Q86UV7 250 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 DTX1Q86Y01 620 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 LINC01555Q8NAE3 123 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 FBXO25Q8TCJ0 367 aa16.2■□□□□ 0.18
CBWD3-211ENST00000615061 KCNJ9Q92806 393 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms