RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CIDEBQ9UHD4 219 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 SLC22A14Q9Y267 594 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 GMPPBQ9Y5P6 360 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 GPR45Q9Y5Y3 372 aa6.25□□□□□ -1.41
SNX13-213ENST00000611725 ABHD14A-ACY1A0A1B0GW23 586 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 SUV39H1O43463 412 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 EEDO75530 441 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 SEC24AO95486 1093 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 PRPS1L1P21108 318 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CRATP43155 626 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 BRAT1Q6PJG6 821 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CYP2U1Q7Z449 544 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 DSG4Q86SJ6 1040 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ZCCHC7Q8N3Z6 543 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 TTC30BQ8N4P2 665 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ANKFN1Q8N957 763 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 SUSD6Q92537 303 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 FBXL20Q96IG2 436 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 MYRFLQ96LU7 910 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 PRICKLE1Q96MT3 831 aaPredicted RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 LIN28AQ9H9Z2 209 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 GMPR2Q9P2T1 348 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 RUVBL1Q9Y265 456 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 ASF1AQ9Y294 204 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 PCDHB3Q9Y5E6 796 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 HTR1EP28566 365 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 GPC1P35052 558 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ABRAXAS2Q15018 415 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 Q6ZSR9 355 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CBARPQ8N350 705 aaPredicted RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 DACH2Q96NX9 599 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CASD1Q96PB1 797 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CD244Q9BZW8 370 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 MAP10Q9P2G4 905 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 TMCC3Q9ULS5 477 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 QSER1Q2KHR3 1735 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 A0A1W2PPW3 197 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ATG13O75143 517 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 C7P10643 843 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 HPCAL1P37235 193 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 GPR1P46091 355 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ZBED5Q49AG3 693 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RAET1GQ6H3X3 334 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RNF111Q6ZNA4 994 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 LRRC70Q7Z2Q7 622 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RAVER1Q8IY67 606 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 TPD52L3Q96J77 140 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 SLC22A12Q96S37 553 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RBM4BQ9BQ04 359 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 RBM4Q9BWF3 364 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 ANKRD60Q9BZ19 345 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 OSGEPL1Q9H4B0 414 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 TUBB1Q9H4B7 451 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 GREB1LQ9C091 1923 aaPredicted RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 TBC1D3BA6NDS4 549 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 G3V2T6 193 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 MMP2P08253 660 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 BPIP17213 487 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RPS3P23396 243 aaKnown RBP eCLIP6.24□□□□□ -1.41
SNX13-213ENST00000611725 ASMTP46597 345 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 YAP1P46937 504 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 SUOXP51687 545 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ARF5P84085 180 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 LMAN2Q12907 356 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 LY6G5CQ5SRR4 150 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 LETMD1Q6P1Q0 360 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CMTR2Q8IYT2 770 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 C11orf65Q8NCR3 313 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 GLMNQ92990 594 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 BIRC8Q96P09 236 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 RIOK2Q9BVS4 552 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 SOX17Q9H6I2 414 aaPredicted RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 KRT84Q9NSB2 600 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 TDP1Q9NUW8 608 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 TMEM45AQ9NWC5 275 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 PDE10AQ9Y233 779 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 GRXCR2A6NFK2 248 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 MAGEB17A8MXT2 336 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 SNAP29O95721 258 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 OR4F3Q6IEY1 312 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 AGTRAPQ6RW13 159 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 ZFAND4Q86XD8 727 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 DTWD1Q8N5C7 304 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 DRAXINQ8NBI3 349 aaPredicted RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 OR8J3Q8NGG0 315 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 PIH1D2Q8WWB5 315 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 DPF3Q92784 378 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 SLC47A1Q96FL8 570 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 EFCAB11Q9BUY7 163 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 CEP44Q9C0F1 390 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 REXO4Q9GZR2 422 aaKnown RBP6.24□□□□□ -1.41
SNX13-213ENST00000611725 CCNB1IP1Q9NPC3 277 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 TIMMDC1Q9NPL8 285 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 IL37Q9NZH6 218 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 MYO9BQ13459 2157 aa6.24□□□□□ -1.41
SNX13-213ENST00000611725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.23□□□□□ -1.41
SNX13-213ENST00000611725 C7orf72A4D263 438 aa6.23□□□□□ -1.41
SNX13-213ENST00000611725 ARNTLO00327 626 aa6.23□□□□□ -1.41
SNX13-213ENST00000611725 PER2O15055 1255 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms