RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FRG2Q64ET8 278 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CYS1Q717R9 158 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 LPCAT2Q7L5N7 544 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 GOLGA7Q7Z5G4 137 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CLVS1Q8IUQ0 354 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■■■ 34.7
CSDE1-218ENST00000610726 GPR135Q8IZ08 494 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 C8orf59Q8N0T1 100 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SETD9Q8NE22 299 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 DENND1AQ8TEH3 1009 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TADA1Q96BN2 335 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 FRG2BQ96QU4 278 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 NDUFA13Q9P0J0 144 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 VPS29Q9UBQ0 182 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TAC3Q9UHF0 121 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF229Q9UJW7 825 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 GTF2A1LQ9UNN4 478 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 RNF11Q9Y3C5 154 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 HCFC2Q9Y5Z7 792 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 POLR2AP24928 1970 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 GJB3O75712 270 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 GBAP04062 536 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PPIBP23284 216 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CTGFP29279 349 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CTSOP43234 321 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 RGRP47804 291 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TRPC1P48995 793 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 C1QTNF8P60827 252 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SPIBQ01892 262 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 COL9A2Q14055 689 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 LRRC32Q14392 662 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SEMA3AQ14563 771 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 MBTPS1Q14703 1052 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PPP1R3AQ16821 1122 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TECRLQ5HYJ1 363 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 NCEH1Q6PIU2 408 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 EPGNQ6UW88 154 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 MBOAT1Q6ZNC8 495 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ERN2Q76MJ5 926 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BNIPLQ7Z465 357 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TRIM69Q86WT6 500 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 SRFBP1Q8NEF9 429 aaKnown RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 VANGL1Q8TAA9 524 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PRICKLE1Q96MT3 831 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BOCQ9BWV1 1114 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 BRINP2Q9C0B6 783 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 KLHL25Q9H0H3 589 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF334Q9HCZ1 680 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-218ENST00000610726 TMEM30AQ9NV96 361 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 PLAGL1Q9UM63 463 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 CORO2BQ9UQ03 480 aa7.13□□□□□ -1.27
CSDE1-218ENST00000610726 GPR39O43194 453 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 NDUFB5O43674 189 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 OR10H3O60404 316 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SERPINB7O75635 380 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC35G6P0C7Q6 338 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CD1DP15813 335 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PRDX6P30041 224 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 YAP1P46937 504 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CAPZA2P47755 286 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 DIO3P55073 304 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ERVFC1P60507 584 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CYP4F3Q08477 520 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 GNA13Q14344 377 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ELAVL3Q14576 367 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 HKDC1Q2TB90 917 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PRAMEF14Q5SWL7 426 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PRAMEF13Q5VWM6 474 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 VN1R5Q7Z5H4 357 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PROSER1Q86XN7 944 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 TBC1D21Q8IYX1 336 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 DEFB119Q8N690 84 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 C1orf52Q8N6N3 182 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 FAM46DQ8NEK8 389 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ADAMTS15Q8TE58 950 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC9A6Q92581 669 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PEX13Q92968 403 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 GLYATL1Q969I3 302 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC47A1Q96FL8 570 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CEP295NLQ96MC4 621 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 VPS35Q96QK1 796 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 TUBGCP5Q96RT8 1024 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 P2RY13Q9BPV8 354 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 KLF16Q9BXK1 252 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ABCG4Q9H172 646 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 DZANK1Q9NVP4 752 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 GRID2O43424 1007 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PCDH7O60245 1069 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 IL6P05231 212 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 IMPDH2P12268 514 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 BPIP17213 487 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 XRCC1P18887 633 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PEX2P28328 305 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 RXRGP48443 463 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 HNMTP50135 292 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CCR3P51677 355 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 COPZ1P61923 177 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 UFM1P61960 85 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms