RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 LIN37Q96GY3 246 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 TGM7Q96PF1 710 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 CD180Q99467 661 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 GPR22Q99680 433 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 OLFM1Q99784 485 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 NRSN2Q9GZP1 204 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 SEMA6CQ9H3T2 930 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 TSR3Q9UJK0 312 aaKnown RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 SLC39A10Q9ULF5 831 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 NFS1Q9Y697 457 aa13.85□□□□□ -0.19
CTSA-219ENST00000607841 ARHGEF17Q96PE2 2063 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 MN1Q10571 1320 aaPredicted RBP13.85□□□□□ -0.19
CTSA-219ENST00000607841 CCDC187A0A096LP49 1063 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 C2orf74A8MZ97 194 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 RIPK2O43353 540 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 PSIP1O75475 530 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 C9P02748 559 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 C8GP07360 202 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 TUBBP07437 444 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 INHBAP08476 426 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 FAM153BP0C7A2 387 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 STMN1P16949 149 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 MPSTP25325 297 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 CSTF2P33240 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTSA-219ENST00000607841 HSD17B2P37059 387 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 TAS2R39P59534 338 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 UAP1Q16222 522 aaPredicted RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 FAM153CQ494X1 144 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 SNAP47Q5SQN1 464 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 WDR93Q6P2C0 686 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 CYHR1Q6ZMK1 362 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 TAOK1Q7L7X3 1001 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 GSPT2Q8IYD1 628 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 WDR36Q8NI36 951 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 EEF1AKMT1Q8WVE0 214 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 ASB11Q8WXH4 323 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 LINGO1Q96FE5 620 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 CCDC74BQ96LY2 380 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 GPAMQ9HCL2 828 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 TMEM9Q9P0T7 183 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 KLHL3Q9UH77 587 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 ICKQ9UPZ9 632 aa13.84□□□□□ -0.19
CTSA-219ENST00000607841 RUVBL2Q9Y230 463 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 MTO1Q9Y2Z2 717 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 GOLGA4Q13439 2230 aaKnown RBP13.84□□□□□ -0.19
CTSA-219ENST00000607841 ZFC3H1O60293 1989 aaKnown RBP13.83□□□□□ -0.19
CTSA-219ENST00000607841 PIPSLA2A3N6 862 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 GSAPA4D1B5 854 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 PABPN1LA6NDY0 278 aaKnown RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 GFYI3L273 518 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 RASGRF2O14827 1237 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 SLC16A5O15375 505 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 RASSF9O75901 435 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 ITGA2BP08514 1039 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 ANKRD34CP0C6C1 535 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 MYBL2P10244 700 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 ZNF37AP17032 561 aaPredicted RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 POLR2CP19387 275 aaPredicted RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 CYP2A7P20853 494 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 MSH2P43246 934 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 GFERP55789 205 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 SP140Q13342 867 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 EFTUD2Q15029 972 aaKnown RBP eCLIP13.83□□□□□ -0.24e-18■■■□□ 18.9
CTSA-219ENST00000607841 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 UBE2R2Q712K3 238 aaPredicted RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 RAB11FIP2Q7L804 512 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 PIWIL4Q7Z3Z4 852 aaKnown RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 MARCH9Q86YJ5 346 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 LSMEM2Q8N112 164 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 CNPY4Q8N129 248 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 CARFQ8N187 725 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 FBXO15Q8NCQ5 510 aaPredicted RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 AGBL5Q8NDL9 886 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 OR9A1PQ8NGU1 263 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 MCOLN3Q8TDD5 553 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 SLC22A18Q96BI1 424 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 NXPE2Q96DL1 559 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 MRRFQ96E11 262 aaKnown RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 PDLIM5Q96HC4 596 aaKnown RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 CCDC77Q9BR77 488 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 TXLNGYQ9BZA5 131 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 XKR8Q9H6D3 395 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 SPATA7Q9P0W8 599 aa13.83□□□□□ -0.2
CTSA-219ENST00000607841 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTSA-219ENST00000607841 V9GYY5 206 aaPredicted RBP13.83□□□□□ -0.2
CTSA-219ENST00000607841 EXOC1LA0A1B0GW35 172 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 TRABD2BA6NFA1 517 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ZNF839A8K0R7 811 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 A8MU76 341 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ARHGEF33A8MVX0 844 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 MYO1CO00159 1063 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 BTN3A3O00478 584 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 BTN3A1O00481 513 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 MAP3K7O43318 606 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 FAM155BO75949 473 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 HIST1H2AGP0C0S8 130 aaPredicted RBP13.82□□□□□ -0.2
CTSA-219ENST00000607841 JMJD7P0C870 316 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 TPBGLP0DKB5 382 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 HIST1H2ADP20671 130 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms