RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 B8ZZF3 427 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TNFRSF13BO14836 293 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 FLRT2O43155 660 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 VEGFDO43915 354 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 BCAS2O75934 225 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 DDHD2O94830 711 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 C8orf89P0DMQ9 161 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 GAP43P17677 238 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 VCLP18206 1134 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TYMPP19971 482 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 CCND3P30281 292 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SLC6A6P31641 620 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 BNC1Q01954 994 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 Q0VFX4 171 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 ZNF234Q14588 700 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 NPTX1Q15818 432 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 CTU2Q2VPK5 515 aaKnown RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SETMARQ53H47 684 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 PXDC1Q5TGL8 231 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 CYB5D1Q6P9G0 228 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 CATSPER4Q7RTX7 472 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 COMMD2Q86X83 199 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 FAM114A1Q8IWE2 563 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 RNF113BQ8IZP6 322 aaKnown RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 PGBD5Q8N414 524 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 GBGT1Q8N5D6 347 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 L3MBTL4Q8NA19 623 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 PPFIBP2Q8ND30 876 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SPATA22Q8NHS9 363 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 NCOA7Q8NI08 942 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 VANGL1Q8TAA9 524 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TMEM255BQ8WV15 326 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TANKQ92844 425 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SEMA4DQ92854 862 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 PHF21AQ96BD5 680 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 KLHL5Q96PQ7 755 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TRIM7Q9C029 511 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 LRMDAQ9H2I8 198 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SRD5A3Q9H8P0 318 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SERINC1Q9NRX5 453 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 PNPLA3Q9NST1 481 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TCP11L1Q9NUJ3 509 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TMEM30AQ9NV96 361 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 ANO10Q9NW15 660 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 TMEM161AQ9NX61 479 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SPG21Q9NZD8 308 aa3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 SPIN1Q9Y657 262 aaPredicted RBP3.96□□□□□ -1.78
AC004542.1-201ENST00000602955 HEG1Q9ULI3 1381 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 ZCWPW2A0A1B0GU75 182 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 C13orf42A0A1B0GVH6 325 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 A0A1W2PPW3 197 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MID1O15344 667 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 TTI1O43156 1089 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 KCNJ13O60928 360 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 NME6O75414 186 aaPredicted RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 PLGP00747 810 aaPredicted RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 C9P02748 559 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 FAM106CPP0CH98 169 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 HAPLN1P10915 354 aaPredicted RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 PCP11498 1178 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MYL6BP14649 208 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CSF2RAP15509 400 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 GM2AP17900 193 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 IL10P22301 178 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CTNNB1P35222 781 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 TMPOP42166 694 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 PSMC4P43686 418 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MMP13P45452 471 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CDX1P47902 265 aaPredicted RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MMP15P51511 669 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CLDN15P56746 228 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 GSDMDP57764 484 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 BRWD1-AS2P59051 145 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 TGFB2P61812 414 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 EGR4Q05215 589 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 SRSF4Q08170 494 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 ZNF155Q12901 538 aaPredicted RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 SGCBQ16585 318 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 SRSF7Q16629 238 aaKnown RBP eCLIP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 IQCCQ4KMZ1 466 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 TMEM35AQ53FP2 167 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 DNAJC21Q5F1R6 531 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MTX3Q5HYI7 312 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 SLC9B2Q86UD5 537 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 EXOC3L1Q86VI1 746 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 TMPRSS12Q86WS5 348 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 PTOV1Q86YD1 416 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CCDC83Q8IWF9 413 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 ARHGAP24Q8N264 748 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CPSF7Q8N684 471 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 RBMXL3Q8N7X1 1067 aaKnown RBP3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 BMPERQ8N8U9 685 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 PRR26Q8N8Z3 221 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 FAM216AQ8WUB2 273 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 CCDC107Q8WV48 283 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 MTBPQ96DY7 904 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 C3orf30Q96M34 536 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 OR1F2PQ96R84 312 aa3.95□□□□□ -1.78
AC004542.1-201ENST00000602955 GAL3ST4Q96RP7 486 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms