RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 SCNM1Q9BWG6 230 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM245Q9H330 911 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FBXO44Q9H4M3 255 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SOX17Q9H6I2 414 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF696Q9H7X3 374 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 IPPKQ9H8X2 491 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 OLFML3Q9NRN5 406 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 FAM120CQ9NX05 1096 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 GUCA1BQ9UMX6 200 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PCDHA4Q9UN74 947 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 GABRQQ9UN88 632 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CSNK1G3Q9Y6M4 447 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SYNGAP1Q96PV0 1343 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 USP42Q9H9J4 1324 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CARMIL3Q8ND23 1372 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MED23Q9ULK4 1368 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 UBR3Q6ZT12 1888 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LIPT2A6NK58 231 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 IQCF5A8MTL0 148 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MYO1GB0I1T2 1018 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 M0R082 166 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CYR61O00622 381 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC16A6O15403 523 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LRRTM2O43300 516 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ARHGEF9O43307 516 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SAP30O75446 220 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TOM1L1O75674 476 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CTDNEP1O95476 244 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SBK2P0C263 348 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TNNI3P19429 210 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ITIH1P19827 911 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PTNP21246 168 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 AMPD1P23109 780 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PBX1P40424 430 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SYKP43405 635 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RPS5P46782 204 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 OR3A3P47888 321 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 LIG4P49917 911 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MFAP4P55083 255 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 BCAR1P56945 870 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PCLAFQ15004 111 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 IFI44LQ53G44 452 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 C1orf146Q5VVC0 180 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MBNL2Q5VZF2 373 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CCDC137Q6PK04 289 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 UNQ6494/PRO21346Q6UXR6 183 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TRMT10CQ7L0Y3 403 aaKnown RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 CROCCP2Q86T23 111 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RASAL3Q86YV0 1011 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PPIL6Q8IXY8 311 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 VGLL2Q8N8G2 317 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 OR6Y1Q8NGX8 325 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF417Q8TAU3 575 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC7A6OSQ96CW6 309 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TMEM80Q96HE8 168 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF578Q96N58 590 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 BTBD9Q96Q07 612 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 ZNF587Q96SQ5 575 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 KCNK16Q96T55 309 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 DPYSL5Q9BPU6 564 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 C11orf84Q9BUA3 381 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 TRIM45Q9H8W5 580 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RIC8BQ9NVN3 520 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SCML1Q9UN30 329 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC6A14Q9UN76 642 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 PACSIN2Q9UNF0 486 aaPredicted RBP4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RCE1Q9Y256 329 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 RIPK3Q9Y572 518 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 MAU2Q9Y6X3 613 aa4.93□□□□□ -1.62
SPTBN1-206ENST00000602898 NRCAMQ92823 1304 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 PRR36Q9H6K5 1346 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 TRBC2A0A5B9 178 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 RAB19A4D1S5 217 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 ASB14A6NK59 587 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 SUPT3HB4E1H0 165 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 H0YJX3 145 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 H3BNX3 289 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 NPHS1O60500 1241 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 NOS1APO75052 506 aaPredicted RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 SERPINI2O75830 405 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 CYP19A1P11511 503 aaPredicted RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 CCDC130P13994 396 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 INSRRP14616 1297 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 PFKLP17858 780 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 TCP1P17987 556 aaKnown RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 PCMT1P22061 227 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 AZGP1P25311 298 aaKnown RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 EPHB2P29323 1055 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 MARCKSP29966 332 aaPredicted RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 CAPGP40121 348 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 CARSP49589 748 aaKnown RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 GNG10P50151 68 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC7A2P52569 658 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 SLC5A3P53794 718 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 TPTEP56180 551 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 SNRPNP63162 240 aaKnown RBP4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 NOGQ13253 232 aa4.92□□□□□ -1.62
SPTBN1-206ENST00000602898 PDK3Q15120 406 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms