RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CAV1Q03135 178 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 FRG1Q14331 258 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 GRB7Q14451 532 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 CCSMST1Q4G0I0 132 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 RBM20Q5T481 1227 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 ANKS6Q68DC2 871 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 UNC5DQ6UXZ4 953 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 CCDC25Q86WR0 208 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 KLHL6Q8WZ60 621 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 TAAR9Q96RI9 348 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 GPR21Q99679 349 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 APMAPQ9HDC9 416 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 SIDT1Q9NXL6 827 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 MOCS1Q9NZB8 636 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 DMGDHQ9UI17 866 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 PCDHGA7Q9Y5G6 932 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 PSAT1Q9Y617 370 aa14.76□□□□□ -0.05
LIG1-219ENST00000600055 TPRP12270 2363 aaKnown RBP14.76□□□□□ -0.05
LIG1-219ENST00000600055 DMXL2Q8TDJ6 3036 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 B4E171 279 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 NVLO15381 856 aaKnown RBP14.75□□□□□ -0.05
LIG1-219ENST00000600055 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
LIG1-219ENST00000600055 C1orf105O95561 183 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 TSPAN7P41732 249 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 PGGT1BP53609 377 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 MC2RQ01718 297 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 MGAT5Q09328 741 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 PRKAA1Q13131 559 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 KCNAB1Q14722 419 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 KYNUQ16719 465 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 KIAA0408Q6ZU52 694 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 ZFAND4Q86XD8 727 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 DCUN1D3Q8IWE4 304 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 PALM2Q8IXS6 379 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 C2orf73Q8N5S3 287 aaPredicted RBP14.75□□□□□ -0.05
LIG1-219ENST00000600055 GABPB2Q8TAK5 448 aaPredicted RBP14.75□□□□□ -0.05
LIG1-219ENST00000600055 CD200R1Q8TD46 325 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 SEC14L1Q92503 715 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 RNF31Q96EP0 1072 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 IL17FQ96PD4 163 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 SMYD2Q9NRG4 433 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 ZDHHC18Q9NUE0 388 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 SPHK1Q9NYA1 384 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 ACTR10Q9NZ32 417 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 SEMA5BQ9P283 1151 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 POMT2Q9UKY4 750 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 DHRS7Q9Y394 339 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 B3GALT1Q9Y5Z6 326 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 COMMD10Q9Y6G5 202 aa14.75□□□□□ -0.05
LIG1-219ENST00000600055 IGF2RP11717 2491 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 TLCD2A6NGC4 264 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 MATN4O95460 622 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 CHRM5P08912 532 aaPredicted RBP14.74□□□□□ -0.05
LIG1-219ENST00000600055 NELFEP18615 380 aaKnown RBP14.74□□□□□ -0.05
LIG1-219ENST00000600055 ITPKBP27987 946 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 PRDX3P30048 256 aaKnown RBP14.74□□□□□ -0.05
LIG1-219ENST00000600055 ATP5DP30049 168 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 PKLRP30613 574 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 SHMT2P34897 504 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 CDKN2DP55273 166 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 GPX6P59796 221 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 FOXM1Q08050 763 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 CPNE9Q8IYJ1 553 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 ZNF248Q8NDW4 579 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 HNRNPLLQ8WVV9 542 aaKnown RBP14.74□□□□□ -0.05
LIG1-219ENST00000600055 UBXN4Q92575 508 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 INPP5DQ92835 1189 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 SLC41A2Q96JW4 573 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 CD180Q99467 661 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 MENTQ9BUN1 341 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 KLHL25Q9H0H3 589 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 ZFATQ9P243 1243 aa14.74□□□□□ -0.05
LIG1-219ENST00000600055 A0A087WV48 116 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 PIPSLA2A3N6 862 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 SLC9B1P1A6NJY1 282 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 CXorf49A8MYA2 514 aaPredicted RBP14.73□□□□□ -0.05
LIG1-219ENST00000600055 C2orf74A8MZ97 194 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 VPS26AO75436 327 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 RPN2P04844 631 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 EBLN1P0CF75 366 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 PVRP15151 417 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 FOLR1P15328 257 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 CDH3P22223 829 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 MCM3P25205 808 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 PEBP1P30086 187 aaKnown RBP14.73□□□□□ -0.05
LIG1-219ENST00000600055 MAGEA4P43358 317 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 TGIF1Q15583 401 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 TTLL9Q3SXZ7 439 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 DCAF12Q5T6F0 453 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 TMEM164Q5U3C3 297 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 C19orf48Q6RUI8 117 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 CYHR1Q6ZMK1 362 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 STRA8Q7Z7C7 330 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 GALNT7Q86SF2 657 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 TRIM73Q86UV7 250 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 TAX1BP1Q86VP1 789 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 CEP112Q8N8E3 955 aa14.73□□□□□ -0.05
LIG1-219ENST00000600055 GPATCH11Q8N954 259 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms