RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 OR4L1Q8NH43 312 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 HDAC10Q969S8 669 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 TCTN2Q96GX1 697 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 RANBP9Q96S59 729 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 NRTNQ99748 197 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 C17orf62Q9BQA9 187 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 DHRS4Q9BTZ2 278 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 ETNK1Q9HBU6 452 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 RAB6BQ9NRW1 208 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 IRAK4Q9NWZ3 460 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 OR6C2Q9NZP2 312 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 ANAPC5Q9UJX4 755 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 PLAAQ9Y263 795 aa9.48□□□□□ -0.89
VRK3-216ENST00000599342 PCDHGA9Q9Y5G4 932 aaKnown RBP9.48□□□□□ -0.89
VRK3-216ENST00000599342 A0A0J9YY10 115 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 SLC5A10A0PJK1 596 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 ISM1B1AKI9 464 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 OR1I1O60431 355 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 VPS4BO75351 444 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 OR2B3O76000 313 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 PDGFAP04085 211 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 RPN2P04844 631 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 APRTP07741 180 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 ADRA1DP25100 572 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 ACADLP28330 430 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 RRADP55042 308 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 CSE1LP55060 971 aaKnown RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 MLLT10P55197 1068 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 HSPA14Q0VDF9 509 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 SNX1Q13596 522 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 UBAP2LQ14157 1087 aaKnown RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 DEFB110Q30KQ9 67 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 DNAJC21Q5F1R6 531 aaKnown RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 LCN10Q6JVE6 187 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 MED25Q71SY5 747 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 NLRP9Q7RTR0 991 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 SLC13A5Q86YT5 568 aaPredicted RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 ADAMTS17Q8TE56 1095 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 C1orf54Q8WWF1 131 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 MIB2Q96AX9 1013 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 OR2A14Q96R47 310 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 TXLNGQ9NUQ3 528 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 PAK5Q9P286 719 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 SLC2A6Q9UGQ3 507 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 GPN3Q9UHW5 284 aaPredicted RBP9.47□□□□□ -0.89
VRK3-216ENST00000599342 RIMKLBQ9ULI2 386 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 PLAGL1Q9UM63 463 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 VPS4AQ9UN37 437 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 TCAF1Q9Y4C2 921 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 ZNF451Q9Y4E5 1061 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 AP1M2Q9Y6Q5 423 aa9.47□□□□□ -0.89
VRK3-216ENST00000599342 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
VRK3-216ENST00000599342 ZNF185O15231 689 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 ZSCAN9O15535 394 aaPredicted RBP9.46□□□□□ -0.9
VRK3-216ENST00000599342 APOA4P06727 396 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 CD63P08962 238 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 ATXN8OSP0DMR3 200 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 GRIA1P42261 906 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 CD97P48960 835 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 BASP1P80723 227 aaKnown RBP9.46□□□□□ -0.9
VRK3-216ENST00000599342 ACVR1Q04771 509 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 KIR2DS3Q14952 304 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 TMED2Q15363 201 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 RPS6KA1Q15418 735 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SLC5A12Q1EHB4 618 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 MLIPQ5VWP3 458 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 RHBDD2Q6NTF9 364 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 TLDC1Q6P9B6 456 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 GAS2L3Q86XJ1 694 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SLC22A15Q8IZD6 547 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 FAM26EQ8N5C1 309 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 GSDMBQ8TAX9 411 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 CPT1CQ8TCG5 803 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 PROKR1Q8TCW9 393 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 PEX13Q92968 403 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 COL26A1Q96A83 441 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SGSM3Q96HU1 749 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 FAM60AQ9NP50 221 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 CASS4Q9NQ75 786 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 CATSPERZQ9NTU4 200 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SPHK1Q9NYA1 384 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 ANKMY1Q9P2S6 941 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 NDOR1Q9UHB4 597 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SRPK3Q9UPE1 567 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 PCDHGB7Q9Y5F8 929 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 ASH1LQ9NR48 2969 aaKnown RBP9.46□□□□□ -0.9
VRK3-216ENST00000599342 TENM4Q6N022 2769 aa9.46□□□□□ -0.9
VRK3-216ENST00000599342 SPTA1P02549 2419 aa9.45□□□□□ -0.9
VRK3-216ENST00000599342 A6NL46 340 aa9.45□□□□□ -0.9
VRK3-216ENST00000599342 PRMT5O14744 637 aaPredicted RBP9.45□□□□□ -0.9
VRK3-216ENST00000599342 DPM1O60762 260 aa9.45□□□□□ -0.9
VRK3-216ENST00000599342 CAPN1P07384 714 aa9.45□□□□□ -0.9
VRK3-216ENST00000599342 ETS1P14921 441 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms